RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Ccdc15Q8C9M2 810 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Igf2bp3Q9CPN8 579 aaKnown RBP19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Homer1Q9Z2Y3 366 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Scn11aQ9R053 1765 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gm45837F7D3W5 961 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Serpinb6eI7HJI3 429 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Casq2O09161 415 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Kcnh2O35219 1162 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gna11P21278 359 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cxcr2P35343 359 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Sash1P59808 1230 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Fam183bQ5NC57 135 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ece2Q80Z60 881 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Inpp5fQ8CDA1 1132 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 OtoaQ8K561 1137 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Bzw2Q91VK1 419 aaKnown RBP19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pde2aQ922S4 916 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pagr1aQ99L02 253 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Trim34aQ99PP6 485 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 IkbipQ9DBZ1 373 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ddx25Q9QY15 484 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Mmrn1B2RPV6 1210 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pon1P52430 355 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cul4aQ3TCH7 759 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Tab3Q571K4 716 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cdcp1Q5U462 833 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Sgms1Q8VCQ6 419 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Zmynd10Q99ML0 440 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Tacc3Q9JJ11 631 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Hdac6Q9Z2V5 1149 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Lactbl1S4R213 581 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Xirp1O70373 1129 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pdk4O70571 412 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cyp2b9P12790 491 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Bmp2P21274 394 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Muc3aQ3U5A2 218 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Skap1Q3UUV5 355 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pnma5Q5DTT8 618 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Oca2Q62052 833 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Klhdc10Q6PAR0 439 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Klhl29Q80T74 875 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rnaseh2bQ80ZV0 308 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rccd1Q8BTU7 377 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ndufv1Q91YT0 464 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 4930519G04RikQ9CPT7 205 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 1700018B08RikQ9DA83 213 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 PlekQ9JHK5 350 aaKnown RBP19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Tex21Q9R0U9 575 aa19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Fxr2Q9WVR4 673 aaKnown RBP19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gys1Q9Z1E4 738 aaKnown RBP19.28■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Lamb1P02469 1786 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Prr5lA2AVJ5 370 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 PtenO08586 403 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Copb2O55029 905 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 H2afzP0C0S6 128 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Znf367Q0VDT2 340 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 H2afvQ3THW5 128 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 DcakdQ8BHC4 231 aaKnown RBP19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Btbd9Q8C726 612 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Q91Z58 1206 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gpihbp1Q9D1N2 228 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rapgef4Q9EQZ6 1011 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Duox1A2AQ92 1551 aa19.27■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Fbf1A2A870 1173 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gm14525B1AZA0 212 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gm2012B1B0R1 212 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ndufaf2Q59J78 168 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Orc2Q60862 576 aaKnown RBP19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gm14819Q62478 212 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 AdalQ80SY6 360 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Q922C1 641 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Pla2g12bQ99P27 195 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Q9D1Z2 194 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ccdc91Q9D8L5 442 aa19.27■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Adgra3Q7TT36 1310 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Nsrp1Q5NCR9 542 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ccdc92bQ5SUE3 299 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 AmphQ7TQF7 686 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Stk38lQ7TSE6 464 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gcfc2Q8BKT3 769 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Pih1h3bQ8C6P5 218 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Tbx22Q8K402 517 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Dnajc19Q9CQV7 116 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Ttc14Q9CSP9 761 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Mcur1Q9CXD6 340 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Dynll2Q9D0M5 89 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Slfn14V9GXG1 899 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Flt1P35969 1333 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gm5936A2BG95 728 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Gm5640A3KG49 728 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Zscan18E9PUD6 809 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rap1gds1E9Q912 607 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 HalP35492 657 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Rbm46P86049 533 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Atf3Q60765 181 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Nlrp14Q6B966 993 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Bbs9Q811G0 885 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 L3mbtl3Q8BLB7 883 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 Efl1Q8C0D5 1127 aa19.26■□□□□ 0.67
Sqstm1-201ENSMUST00000015981 ItpkaQ8R071 459 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms