RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ITR1P30605 584 aa1.86□□□□□ -2.11
HER1YOR227W MSS51P32335 436 aa1.86□□□□□ -2.11
HER1YOR227W ZUO1P32527 433 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W CBF5P33322 483 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
HER1YOR227W MTR2P34232 184 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W MRX3P38172 270 aa1.86□□□□□ -2.11
HER1YOR227W TSC10P38342 320 aa1.86□□□□□ -2.11
HER1YOR227W MBB1P39534 108 aa1.86□□□□□ -2.11
HER1YOR227W PHM8P40025 321 aa1.86□□□□□ -2.11
HER1YOR227W UTP18P40362 594 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W CDC1P40986 491 aa1.86□□□□□ -2.11
HER1YOR227W STE24P47154 453 aa1.86□□□□□ -2.11
HER1YOR227W BET4Q00618 327 aa1.86□□□□□ -2.11
HER1YOR227W MUK1Q02866 612 aa1.86□□□□□ -2.11
HER1YOR227W MMT1Q03218 510 aa1.86□□□□□ -2.11
HER1YOR227W DIS3Q08162 1001 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W BSC6Q08280 497 aa1.86□□□□□ -2.11
HER1YOR227W IES4Q08561 116 aa1.86□□□□□ -2.11
HER1YOR227W LSP1Q12230 341 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W YOL107WQ12239 342 aa1.86□□□□□ -2.11
HER1YOR227W APC2Q12440 853 aa1.86□□□□□ -2.11
HER1YOR227W LAG2Q92325 660 aa1.86□□□□□ -2.11
HER1YOR227W STE2D6VTK4 431 aa1.86□□□□□ -2.11
HER1YOR227W CHS1P08004 1131 aa1.86□□□□□ -2.11
HER1YOR227W PRP16P15938 1071 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W RPO26P20435 155 aa1.86□□□□□ -2.11
HER1YOR227W ADH7P25377 361 aa1.86□□□□□ -2.11
HER1YOR227W IMG1P25626 169 aa1.86□□□□□ -2.11
HER1YOR227W CIN8P27895 1000 aa1.86□□□□□ -2.11
HER1YOR227W YPS1P32329 569 aa1.86□□□□□ -2.11
HER1YOR227W PRP21P32524 280 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W TOA2P32774 122 aa1.86□□□□□ -2.11
HER1YOR227W YPK3P38070 525 aa1.86□□□□□ -2.11
HER1YOR227W AGP2P38090 596 aa1.86□□□□□ -2.11
HER1YOR227W RCY1P39531 840 aa1.86□□□□□ -2.11
HER1YOR227W ACO2P39533 789 aa1.86□□□□□ -2.11
HER1YOR227W SDS3P40505 327 aa1.86□□□□□ -2.11
HER1YOR227W YIR016WP40572 265 aa1.86□□□□□ -2.11
HER1YOR227W SPG5P42933 373 aa1.86□□□□□ -2.11
HER1YOR227W DPB11P47027 764 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W EMC2P47133 292 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W YDL186WP48568 277 aa1.86□□□□□ -2.11
HER1YOR227W ATG4P53867 494 aa1.86□□□□□ -2.11
HER1YOR227W MTQ1P53944 314 aa1.86□□□□□ -2.11
HER1YOR227W YMR087WQ04299 284 aa1.86□□□□□ -2.11
HER1YOR227W COX20Q04935 205 aa1.86□□□□□ -2.11
HER1YOR227W RRP45Q05636 305 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W YLR283WQ05867 314 aa1.86□□□□□ -2.11
HER1YOR227W YDL177CQ12257 170 aa1.86□□□□□ -2.11
HER1YOR227W TDH2P00358 332 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W AI3P03877 415 aa1.86□□□□□ -2.11
HER1YOR227W HIS5P07172 385 aa1.86□□□□□ -2.11
HER1YOR227W YPK2P18961 677 aa1.86□□□□□ -2.11
HER1YOR227W GAR1P28007 205 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W PEX3P28795 441 aa1.86□□□□□ -2.11
HER1YOR227W RIM1P32445 135 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W QDR3P38227 689 aa1.86□□□□□ -2.11
HER1YOR227W GDT1P38301 280 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W PTC7P38797 343 aa1.86□□□□□ -2.11
HER1YOR227W RTT107P38850 1070 aa1.86□□□□□ -2.11
HER1YOR227W ATM1P40416 690 aa1.86□□□□□ -2.11
HER1YOR227W YJL118WP47022 219 aa1.86□□□□□ -2.11
HER1YOR227W PYK2P52489 506 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W RMR1P53060 241 aa1.86□□□□□ -2.11
HER1YOR227W SCW11P53189 542 aa1.86□□□□□ -2.11
HER1YOR227W MRPL22P53881 309 aa1.86□□□□□ -2.11
HER1YOR227W RLI1Q03195 608 aaKnown RBP1.86□□□□□ -2.11
HER1YOR227W ATC1Q04005 294 aa1.86□□□□□ -2.11
HER1YOR227W AIM33Q04516 312 aa1.86□□□□□ -2.11
HER1YOR227W APC4Q04601 652 aa1.86□□□□□ -2.11
HER1YOR227W HRD3Q05787 833 aa1.86□□□□□ -2.11
HER1YOR227W ARR2Q06597 130 aa1.86□□□□□ -2.11
HER1YOR227W YDL176WQ12027 708 aa1.86□□□□□ -2.11
HER1YOR227W DCP1Q12517 231 aaPredicted RBP1.86□□□□□ -2.11
HER1YOR227W NCB2Q92317 146 aa1.86□□□□□ -2.11
HER1YOR227W ADH2P00331 348 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W SCEIP03882 235 aa1.85□□□□□ -2.11
HER1YOR227W GID7P25569 745 aa1.85□□□□□ -2.11
HER1YOR227W KAR4P25583 335 aa1.85□□□□□ -2.11
HER1YOR227W PMI40P29952 429 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W RPC25P35718 212 aa1.85□□□□□ -2.11
HER1YOR227W COS9P36034 407 aa1.85□□□□□ -2.11
HER1YOR227W YKL162CP36052 402 aa1.85□□□□□ -2.11
HER1YOR227W ELF1P36053 145 aa1.85□□□□□ -2.11
HER1YOR227W MAK5P38112 773 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W KAP114P53067 1004 aa1.85□□□□□ -2.11
HER1YOR227W TRM112P53738 135 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W RAX1Q08760 435 aa1.85□□□□□ -2.11
HER1YOR227W GRE1Q08969 168 aa1.85□□□□□ -2.11
HER1YOR227W MRH1Q12117 320 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W YDR262WQ12331 272 aa1.85□□□□□ -2.11
HER1YOR227W NPC2Q12408 173 aa1.85□□□□□ -2.11
HER1YOR227W ARG4P04076 463 aaPredicted RBP1.85□□□□□ -2.11
HER1YOR227W COR1P07256 457 aa1.85□□□□□ -2.11
HER1YOR227W GDH1P07262 454 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W RPL35AP0CX84 120 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W RPL35BP0CX85 120 aaKnown RBP1.85□□□□□ -2.11
HER1YOR227W ATP10P18496 279 aa1.85□□□□□ -2.11
HER1YOR227W PDE1P22434 369 aa1.85□□□□□ -2.11
HER1YOR227W RPI1P23250 407 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms