RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W ARG4P04076 463 aaPredicted RBP4.25□□□□□ -1.73
AVT1YJR001W YGL041W-AP0C5N3 154 aa4.25□□□□□ -1.73
AVT1YJR001W PYC1P11154 1178 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W CKI1P20485 582 aa4.25□□□□□ -1.73
AVT1YJR001W CIN8P27895 1000 aa4.25□□□□□ -1.73
AVT1YJR001W BEM1P29366 551 aa4.25□□□□□ -1.73
AVT1YJR001W GSH1P32477 678 aa4.25□□□□□ -1.73
AVT1YJR001W YSC84P32793 468 aa4.25□□□□□ -1.73
AVT1YJR001W YOX1P34161 385 aa4.25□□□□□ -1.73
AVT1YJR001W TUL1P36096 758 aa4.25□□□□□ -1.73
AVT1YJR001W GRE3P38715 327 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
AVT1YJR001W FAD1P38913 306 aa4.25□□□□□ -1.73
AVT1YJR001W FMC1P40491 155 aa4.25□□□□□ -1.73
AVT1YJR001W GVP36P40531 326 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W SSY5P47002 699 aa4.25□□□□□ -1.73
AVT1YJR001W RPS7BP48164 190 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W AMA1P50082 593 aa4.25□□□□□ -1.73
AVT1YJR001W YGL159WP53110 370 aa4.25□□□□□ -1.73
AVT1YJR001W SHY1P53266 389 aa4.25□□□□□ -1.73
AVT1YJR001W TNA1P53322 534 aa4.25□□□□□ -1.73
AVT1YJR001W DBP6P53734 629 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W NOP13P53883 403 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
AVT1YJR001W MRP51Q02950 344 aa4.25□□□□□ -1.73
AVT1YJR001W SNX41Q04053 625 aa4.25□□□□□ -1.73
AVT1YJR001W YPR127WQ06494 345 aa4.25□□□□□ -1.73
AVT1YJR001W GPN3Q06543 272 aa4.25□□□□□ -1.73
AVT1YJR001W MHR1Q06630 226 aa4.25□□□□□ -1.73
AVT1YJR001W RFU1Q08003 200 aa4.25□□□□□ -1.73
AVT1YJR001W RCL1Q08096 367 aaPredicted RBP4.25□□□□□ -1.73
AVT1YJR001W RDR1Q08904 546 aa4.25□□□□□ -1.73
AVT1YJR001W FYV7Q12247 151 aa4.25□□□□□ -1.73
AVT1YJR001W PNO1Q99216 274 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W DFG16Q99234 619 aa4.25□□□□□ -1.73
AVT1YJR001W Q0144Q9ZZW2 109 aa4.25□□□□□ -1.73
AVT1YJR001W LYS2P07702 1392 aa4.25□□□□□ -1.73
AVT1YJR001W RPP1AP05318 106 aaPredicted RBP4.25□□□□□ -1.73
AVT1YJR001W PDA1P16387 420 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W PDC5P16467 563 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W SNF6P18888 332 aa4.25□□□□□ -1.73
AVT1YJR001W URK1P27515 501 aa4.25□□□□□ -1.73
AVT1YJR001W SIP1P32578 815 aa4.25□□□□□ -1.73
AVT1YJR001W GSP1P32835 219 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W GSP2P32836 220 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W EHT1P38295 451 aa4.25□□□□□ -1.73
AVT1YJR001W TSC10P38342 320 aa4.25□□□□□ -1.73
AVT1YJR001W URA8P38627 578 aaPredicted RBP4.25□□□□□ -1.73
AVT1YJR001W UBA4P38820 440 aa4.25□□□□□ -1.73
AVT1YJR001W RFC4P40339 323 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W SEC24P40482 926 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W GTS1P40956 396 aa4.25□□□□□ -1.73
AVT1YJR001W COS5P47187 383 aa4.25□□□□□ -1.73
AVT1YJR001W STR3P53101 465 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W DRN1P53255 507 aaKnown RBP4.25□□□□□ -1.73
AVT1YJR001W CUS2P53830 285 aaPredicted RBP4.25□□□□□ -1.73
AVT1YJR001W APC4Q04601 652 aa4.25□□□□□ -1.73
AVT1YJR001W RRG8Q06109 277 aa4.25□□□□□ -1.73
AVT1YJR001W CDA2Q06703 312 aa4.25□□□□□ -1.73
AVT1YJR001W COS7Q07788 383 aa4.25□□□□□ -1.73
AVT1YJR001W ATG9Q12142 997 aa4.25□□□□□ -1.73
AVT1YJR001W YDR262WQ12331 272 aa4.25□□□□□ -1.73
AVT1YJR001W YBR085C-AO43137 85 aa4.24□□□□□ -1.73
AVT1YJR001W RAD1P06777 1100 aa4.24□□□□□ -1.73
AVT1YJR001W TUB3P09734 445 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W RNR2P09938 399 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W GCN3P14741 305 aa4.24□□□□□ -1.73
AVT1YJR001W PPH22P23595 377 aa4.24□□□□□ -1.73
AVT1YJR001W IDH1P28834 360 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
AVT1YJR001W PDB1P32473 366 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W SRB5P32585 307 aa4.24□□□□□ -1.73
AVT1YJR001W SCO2P38072 301 aa4.24□□□□□ -1.73
AVT1YJR001W ZTA1P38230 334 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W IMD2P38697 523 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W CRG1P38892 291 aaRIP-Chip data4.24□□□□□ -1.73not detected
AVT1YJR001W CYC2P38909 366 aa4.24□□□□□ -1.73
AVT1YJR001W END3P39013 349 aa4.24□□□□□ -1.73
AVT1YJR001W YIL108WP40483 696 aaKnown RBP4.24□□□□□ -1.73
AVT1YJR001W IRC7P43623 340 aa4.24□□□□□ -1.73
AVT1YJR001W BIT61P47041 543 aa4.24□□□□□ -1.73
AVT1YJR001W NAS6P50086 228 aa4.24□□□□□ -1.73
AVT1YJR001W COS12P53053 380 aa4.24□□□□□ -1.73
AVT1YJR001W MRM2P53123 320 aa4.24□□□□□ -1.73
AVT1YJR001W YGL114WP53134 725 aa4.24□□□□□ -1.73
AVT1YJR001W NUP116Q02630 1113 aa4.24□□□□□ -1.73
AVT1YJR001W SKI8Q02793 397 aaPredicted RBP4.24□□□□□ -1.73
AVT1YJR001W NHP10Q03435 203 aa4.24□□□□□ -1.73
AVT1YJR001W MFG1Q07684 458 aa4.24□□□□□ -1.73
AVT1YJR001W NRT1Q08485 598 aa4.24□□□□□ -1.73
AVT1YJR001W ATP6P00854 259 aa4.23□□□□□ -1.73
AVT1YJR001W GPM1P00950 247 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W RPL24AP04449 155 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W QCR2P07257 368 aa4.23□□□□□ -1.73
AVT1YJR001W ILV2P07342 687 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W YML003WP0CF16 290 aa4.23□□□□□ -1.73
AVT1YJR001W NHP6AP11632 93 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W HPR1P17629 752 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W ADE1P27616 306 aa4.23□□□□□ -1.73
AVT1YJR001W GCG1P32656 232 aaKnown RBP4.23□□□□□ -1.73
AVT1YJR001W LIP5P32875 414 aa4.23□□□□□ -1.73
AVT1YJR001W AST1P35183 429 aa4.23□□□□□ -1.73
AVT1YJR001W AGP2P38090 596 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms