RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C VMA9Q3E7B6 73 aa3.01□□□□□ -1.93
RPN1YHR027C CYC1P00044 109 aaPredicted RBP3.01□□□□□ -1.93
RPN1YHR027C GAL80P04387 435 aa3.01□□□□□ -1.93
RPN1YHR027C CTT1P06115 562 aa3.01□□□□□ -1.93
RPN1YHR027C EST1P17214 699 aaPredicted RBP3.01□□□□□ -1.93
RPN1YHR027C UTR1P21373 530 aa3.01□□□□□ -1.93
RPN1YHR027C YUR1P26725 428 aa3.01□□□□□ -1.93
RPN1YHR027C DBF4P32325 704 aa3.01□□□□□ -1.93
RPN1YHR027C SRB6P32570 121 aa3.01□□□□□ -1.93
RPN1YHR027C CTF13P35203 478 aa3.01□□□□□ -1.93
RPN1YHR027C PHO11P35842 467 aa3.01□□□□□ -1.93
RPN1YHR027C AIM29P36154 155 aa3.01□□□□□ -1.93
RPN1YHR027C TOS1P38288 455 aa3.01□□□□□ -1.93
RPN1YHR027C EXO5P38289 585 aa3.01□□□□□ -1.93
RPN1YHR027C PHO12P38693 467 aa3.01□□□□□ -1.93
RPN1YHR027C FSH1P38777 243 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C UTP7P40055 554 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C RGD2P43556 714 aa3.01□□□□□ -1.93
RPN1YHR027C SPO74P45819 413 aa3.01□□□□□ -1.93
RPN1YHR027C MOG1P47123 218 aa3.01□□□□□ -1.93
RPN1YHR027C RTA1P53047 317 aa3.01□□□□□ -1.93
RPN1YHR027C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
RPN1YHR027C TRS31Q03337 283 aa3.01□□□□□ -1.93
RPN1YHR027C MAK3Q03503 176 aa3.01□□□□□ -1.93
RPN1YHR027C YPR147CQ06522 304 aaKnown RBP3.01□□□□□ -1.93
RPN1YHR027C ENT4Q07872 247 aa3.01□□□□□ -1.93
RPN1YHR027C LAP2Q10740 671 aa3.01□□□□□ -1.93
RPN1YHR027C Q0142Q9ZZW4 58 aa3.01□□□□□ -1.93
RPN1YHR027C FLP1P03870 423 aa3□□□□□ -1.93
RPN1YHR027C RAD52P06778 471 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C TRP4P07285 380 aaPredicted RBP3□□□□□ -1.93
RPN1YHR027C RPL31AP0C2H8 113 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RPL31BP0C2H9 113 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C YEL076C-AP0CX16 216 aa3□□□□□ -1.93
RPN1YHR027C YLR464WP0CX17 216 aa3□□□□□ -1.93
RPN1YHR027C GUK1P15454 187 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C GID7P25569 745 aa3□□□□□ -1.93
RPN1YHR027C PPZ1P26570 692 aa3□□□□□ -1.93
RPN1YHR027C GUT1P32190 709 aa3□□□□□ -1.93
RPN1YHR027C SSS1P35179 80 aa3□□□□□ -1.93
RPN1YHR027C YKL162CP36052 402 aa3□□□□□ -1.93
RPN1YHR027C NOP4P37838 685 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C HMT1P38074 348 aa3□□□□□ -1.93
RPN1YHR027C SHG1P38337 142 aa3□□□□□ -1.93
RPN1YHR027C RSC30P38781 883 aa3□□□□□ -1.93
RPN1YHR027C RBG1P39729 369 aa3□□□□□ -1.93
RPN1YHR027C YEL076CP39971 216 aa3□□□□□ -1.93
RPN1YHR027C PCL7P40186 285 aa3□□□□□ -1.93
RPN1YHR027C ATM1P40416 690 aa3□□□□□ -1.93
RPN1YHR027C YIL108WP40483 696 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C YFL040WP43562 540 aa3□□□□□ -1.93
RPN1YHR027C TAX4P47030 604 aa3□□□□□ -1.93
RPN1YHR027C PKP2P53170 491 aa3□□□□□ -1.93
RPN1YHR027C YGL039WP53183 348 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RRN9P53437 365 aa3□□□□□ -1.93
RPN1YHR027C REG1Q00816 1014 aa3□□□□□ -1.93
RPN1YHR027C ODC1Q03028 310 aa3□□□□□ -1.93
RPN1YHR027C YDR222WQ04925 415 aa3□□□□□ -1.93
RPN1YHR027C OPT2Q06593 877 aa3□□□□□ -1.93
RPN1YHR027C YPL272CQ08984 517 aa3□□□□□ -1.93
RPN1YHR027C NSL1Q12143 216 aa3□□□□□ -1.93
RPN1YHR027C RRP42Q12277 265 aaPredicted RBP3□□□□□ -1.93
RPN1YHR027C YLR126CQ12288 251 aa3□□□□□ -1.93
RPN1YHR027C YOP1Q12402 180 aa3□□□□□ -1.93
RPN1YHR027C YPR145C-AQ2V2P0 78 aa3□□□□□ -1.93
RPN1YHR027C YOL159C-AQ3E769 90 aa3□□□□□ -1.93
RPN1YHR027C SPS2P08459 502 aa3□□□□□ -1.93
RPN1YHR027C YER152CP10356 443 aa3□□□□□ -1.93
RPN1YHR027C TCP1P12612 559 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C ACO1P19414 778 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
RPN1YHR027C PRE1P22141 198 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RFA1P22336 621 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C GRR1P24814 1151 aa3□□□□□ -1.93
RPN1YHR027C YCL002CP25565 263 aa3□□□□□ -1.93
RPN1YHR027C EMC1P25574 760 aa3□□□□□ -1.93
RPN1YHR027C TRK2P28584 889 aa3□□□□□ -1.93
RPN1YHR027C TCA17P32613 152 aa3□□□□□ -1.93
RPN1YHR027C GLR1P41921 483 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C FIG4P42837 879 aa3□□□□□ -1.93
RPN1YHR027C YJL045WP47052 634 aa3□□□□□ -1.93
RPN1YHR027C TNA1P53322 534 aa3□□□□□ -1.93
RPN1YHR027C BUD32P53323 261 aa3□□□□□ -1.93
RPN1YHR027C ALG12P53730 551 aa3□□□□□ -1.93
RPN1YHR027C IDP3P53982 420 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RPS15Q01855 142 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C TOF2Q02208 771 aa3□□□□□ -1.93
RPN1YHR027C YPL014WQ02606 381 aa3□□□□□ -1.93
RPN1YHR027C CTL1Q03220 320 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C HED1Q03937 162 aa3□□□□□ -1.93
RPN1YHR027C SEN15Q04675 128 aa3□□□□□ -1.93
RPN1YHR027C TVP18Q04767 167 aa3□□□□□ -1.93
RPN1YHR027C YDL129WQ07555 291 aa3□□□□□ -1.93
RPN1YHR027C ERG27Q12452 347 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C YPR014CQ6B0W2 109 aa3□□□□□ -1.93
RPN1YHR027C UBR2Q07963 1872 aa3□□□□□ -1.93
RPN1YHR027C ADH2P00331 348 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RNR1P21524 888 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C ERG6P25087 383 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RRP7P25368 297 aaPredicted RBP3□□□□□ -1.93
RPN1YHR027C IMG1P25626 169 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms