RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C ISR1Q06098 443 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C YLR456WQ06199 204 aa7.35□□□□□ -1.23
PUP3YER094C FDH1Q08911 376 aa7.35□□□□□ -1.23
PUP3YER094C DBP10Q12389 995 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C NKP1Q12493 238 aa7.35□□□□□ -1.23
PUP3YER094C YOR019WQ99248 730 aa7.35□□□□□ -1.23
PUP3YER094C FAR1P21268 830 aa7.34□□□□□ -1.23
PUP3YER094C MSB1P21339 1137 aaKnown RBP7.34□□□□□ -1.23
PUP3YER094C SLY41P22215 453 aa7.34□□□□□ -1.23
PUP3YER094C CHA1P25379 360 aaKnown RBP7.34□□□□□ -1.23
PUP3YER094C YIM1P28625 365 aa7.34□□□□□ -1.23
PUP3YER094C PTP2P29461 750 aa7.34□□□□□ -1.23
PUP3YER094C YMC1P32331 307 aa7.34□□□□□ -1.23
PUP3YER094C MSN2P33748 704 aa7.34□□□□□ -1.23
PUP3YER094C SPC42P36094 363 aa7.34□□□□□ -1.23
PUP3YER094C MTG2P38860 518 aa7.34□□□□□ -1.23
PUP3YER094C YAR028WP39548 234 aa7.34□□□□□ -1.23
PUP3YER094C MPH1P40562 993 aa7.34□□□□□ -1.23
PUP3YER094C TIM54P47045 478 aa7.34□□□□□ -1.23
PUP3YER094C RPS12P48589 143 aaKnown RBP7.34□□□□□ -1.23
PUP3YER094C ATF2P53296 535 aa7.34□□□□□ -1.23
PUP3YER094C REC102Q02721 264 aa7.34□□□□□ -1.23
PUP3YER094C ELP4Q02884 456 aaKnown RBP7.34□□□□□ -1.23
PUP3YER094C RSC9Q03124 581 aa7.34□□□□□ -1.23
PUP3YER094C RIM13Q03792 727 aa7.34□□□□□ -1.23
PUP3YER094C BSC6Q08280 497 aa7.34□□□□□ -1.23
PUP3YER094C GLE1Q12315 538 aa7.34□□□□□ -1.23
PUP3YER094C TSC13Q99190 310 aa7.34□□□□□ -1.23
PUP3YER094C HFA1P32874 2273 aa7.34□□□□□ -1.24
PUP3YER094C SEN1Q00416 2231 aaKnown RBP7.33□□□□□ -1.24
PUP3YER094C CDC4P07834 779 aa7.33□□□□□ -1.24
PUP3YER094C ARE1P25628 610 aa7.33□□□□□ -1.24
PUP3YER094C CMK1P27466 446 aaKnown RBP7.33□□□□□ -1.24
PUP3YER094C SAC1P32368 623 aaKnown RBP7.33□□□□□ -1.24
PUP3YER094C CYS4P32582 507 aaKnown RBP7.33□□□□□ -1.24
PUP3YER094C AUR1P36107 401 aaPredicted RBP7.33□□□□□ -1.24
PUP3YER094C TDA11P38854 504 aa7.33□□□□□ -1.24
PUP3YER094C FMP52P40008 231 aa7.33□□□□□ -1.24
PUP3YER094C TRM9P49957 279 aa7.33□□□□□ -1.24
PUP3YER094C TWF1P53250 332 aa7.33□□□□□ -1.24
PUP3YER094C YEH1Q07804 573 aa7.33□□□□□ -1.24
PUP3YER094C MRX4Q12467 430 aa7.33□□□□□ -1.24
PUP3YER094C PET9P18239 318 aaKnown RBP7.32□□□□□ -1.24
PUP3YER094C BCK2P33306 851 aa7.32□□□□□ -1.24
PUP3YER094C PET112P33893 541 aa7.32□□□□□ -1.24
PUP3YER094C LOT5P34234 306 aa7.32□□□□□ -1.24
PUP3YER094C TAF14P35189 244 aa7.32□□□□□ -1.24
PUP3YER094C VPS51P36116 164 aa7.32□□□□□ -1.24
PUP3YER094C MRPL15P36523 253 aa7.32□□□□□ -1.24
PUP3YER094C YBR238CP38330 731 aaKnown RBP7.32□□□□□ -1.24
PUP3YER094C TRR2P38816 342 aa7.32□□□□□ -1.24
PUP3YER094C MET28P40573 187 aa7.32□□□□□ -1.24
PUP3YER094C CAK1P43568 368 aaPredicted RBP7.32□□□□□ -1.24
PUP3YER094C EMC2P47133 292 aaKnown RBP7.32□□□□□ -1.24
PUP3YER094C NRM1P53718 249 aa7.32□□□□□ -1.24
PUP3YER094C ERG13P54839 491 aaKnown RBP7.32□□□□□ -1.24
PUP3YER094C YPL107WQ02873 248 aa7.32□□□□□ -1.24
PUP3YER094C ARO10Q06408 635 aa7.32□□□□□ -1.24
PUP3YER094C BSC1Q12140 328 aa7.32□□□□□ -1.24
PUP3YER094C SEC39Q12745 709 aa7.32□□□□□ -1.24
PUP3YER094C CYR1P08678 2026 aaKnown RBP7.32□□□□□ -1.24
PUP3YER094C YCR006CP25350 157 aa7.31□□□□□ -1.24
PUP3YER094C CTR86P25355 563 aa7.31□□□□□ -1.24
PUP3YER094C GSH1P32477 678 aa7.31□□□□□ -1.24
PUP3YER094C RPN2P32565 945 aaKnown RBP7.31□□□□□ -1.24
PUP3YER094C MRPL6P32904 214 aa7.31□□□□□ -1.24
PUP3YER094C TIF3P34167 436 aaKnown RBP7.31□□□□□ -1.24
PUP3YER094C LHS1P36016 881 aa7.31□□□□□ -1.24
PUP3YER094C COG3P40094 801 aa7.31□□□□□ -1.24
PUP3YER094C YIL086CP40503 102 aa7.31□□□□□ -1.24
PUP3YER094C YGR012WP53206 393 aa7.31□□□□□ -1.24
PUP3YER094C SPO19Q03029 223 aa7.31□□□□□ -1.24
PUP3YER094C RAD30Q04049 632 aa7.31□□□□□ -1.24
PUP3YER094C YLR126CQ12288 251 aa7.31□□□□□ -1.24
PUP3YER094C YDR061WQ12298 539 aa7.31□□□□□ -1.24
PUP3YER094C SEC2P17065 759 aa7.3□□□□□ -1.24
PUP3YER094C MXR2P25566 168 aa7.3□□□□□ -1.24
PUP3YER094C RPC82P32349 654 aa7.3□□□□□ -1.24
PUP3YER094C YME2P32843 850 aa7.3□□□□□ -1.24
PUP3YER094C PTR2P32901 601 aa7.3□□□□□ -1.24
PUP3YER094C BET3P36149 193 aa7.3□□□□□ -1.24
PUP3YER094C YBR285WP38354 144 aa7.3□□□□□ -1.24
PUP3YER094C AAD10P47182 288 aa7.3□□□□□ -1.24
PUP3YER094C MON1P53129 644 aa7.3□□□□□ -1.24
PUP3YER094C PRM8P53174 237 aa7.3□□□□□ -1.24
PUP3YER094C TPS1Q00764 495 aaKnown RBP7.3□□□□□ -1.24
PUP3YER094C YMR099CQ03161 297 aaKnown RBP7.3□□□□□ -1.24
PUP3YER094C NAT4Q04751 285 aa7.3□□□□□ -1.24
PUP3YER094C YPR091CQ06833 770 aa7.3□□□□□ -1.24
PUP3YER094C YOL036WQ08206 761 aa7.3□□□□□ -1.24
PUP3YER094C MHF1Q3E835 90 aa7.3□□□□□ -1.24
PUP3YER094C RIB3Q99258 208 aa7.3□□□□□ -1.24
PUP3YER094C FAS1P07149 2051 aaKnown RBP7.29□□□□□ -1.24
PUP3YER094C BRR2P32639 2163 aaKnown RBP7.29□□□□□ -1.24
PUP3YER094C KSS1P14681 368 aa7.29□□□□□ -1.24
PUP3YER094C AAC3P18238 307 aa7.29□□□□□ -1.24
PUP3YER094C APN1P22936 367 aa7.29□□□□□ -1.24
PUP3YER094C RHB1P25378 209 aa7.29□□□□□ -1.24
PUP3YER094C IDH1P28834 360 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
PUP3YER094C RPS27AP35997 82 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms