RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 FAM26DQ5JW98 314 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 MARCH8Q5T0T0 291 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 TUBE1Q9UJT0 475 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 INSL6Q9Y581 213 aa15.9■□□□□ 0.14
LINC00339-211ENST00000641009 TTC3P53804 2025 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-211ENST00000641009 ADAMTS3O15072 1205 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 SCG2P13521 617 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 SREBF1P36956 1147 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 ERVK-21P61565 698 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 IGBP1P78318 339 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
LINC00339-211ENST00000641009 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 CEP55Q53EZ4 464 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 TAF2Q6P1X5 1199 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 TGS1Q96RS0 853 aaKnown RBP15.89■□□□□ 0.13
LINC00339-211ENST00000641009 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 IFIH1Q9BYX4 1025 aaKnown RBP15.89■□□□□ 0.13
LINC00339-211ENST00000641009 SUGCTQ9HAC7 445 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
LINC00339-211ENST00000641009 NFASCO94856 1347 aa15.89■□□□□ 0.13
LINC00339-211ENST00000641009 CCDC196A0A1B0GTZ2 297 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 MBLAC1A4D2B0 266 aaPredicted RBP15.88■□□□□ 0.13
LINC00339-211ENST00000641009 PPFIA3O75145 1194 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 UPP2O95045 317 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 RPS6KB1P23443 525 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 ACTR2P61160 394 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 HTRA4P83105 476 aaPredicted RBP15.88■□□□□ 0.13
LINC00339-211ENST00000641009 MGAT3Q09327 533 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 JAKMIP3Q5VZ66 844 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 RPAINQ86UA6 219 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 DNAJB3Q8WWF6 145 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 GLT8D2Q9H1C3 349 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 AZI2Q9H6S1 392 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 NID2Q14112 1375 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 KIAA1671Q9BY89 1806 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 MYO7AQ13402 2215 aa15.88■□□□□ 0.13
LINC00339-211ENST00000641009 MEIS1O00470 390 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 GHRP10912 638 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 INSRRP14616 1297 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 ZNF76P36508 570 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 PKN1Q16512 942 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 ADAMTS19Q8TE59 1207 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 APBB2Q92870 758 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 PHKBQ93100 1093 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 TOP1MTQ969P6 601 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 UIMC1Q96RL1 719 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 C17orf80Q9BSJ5 609 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 TRPC6Q9Y210 931 aa15.87■□□□□ 0.13
LINC00339-211ENST00000641009 FAM86B1E9PN63 330 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 DDX39AO00148 427 aaKnown RBP15.86■□□□□ 0.13
LINC00339-211ENST00000641009 REC8O95072 547 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 FAM86B2P0C5J1 330 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 KCNQ1P51787 676 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 LPIN1Q14693 890 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 RSPH3Q86UC2 560 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 IL27Q8NEV9 243 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 SP7Q8TDD2 431 aaPredicted RBP15.86■□□□□ 0.13
LINC00339-211ENST00000641009 TRAPPC12Q8WVT3 735 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 AGXT2Q9BYV1 514 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 C5orf42Q9H799 3197 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 COL4A6Q14031 1691 aa15.86■□□□□ 0.13
LINC00339-211ENST00000641009 TNFRSF10AO00220 468 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 CCNE2O96020 404 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 STAT5BP51692 787 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 PLA2G4DQ86XP0 818 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 FBXL16Q8N461 479 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 CRYGNQ8WXF5 182 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 ZMYND12Q9H0C1 365 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 FAM49AQ9H0Q0 323 aaPredicted RBP15.85■□□□□ 0.13
LINC00339-211ENST00000641009 CDY2AQ9Y6F7 541 aa15.85■□□□□ 0.13
LINC00339-211ENST00000641009 IGLV3-22A0A075B6J6 115 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 ESYT2A0FGR8 921 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 RRN3P2A6NIE6 340 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 PRPF3O43395 683 aaKnown RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 ATG7O95352 703 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 CCT2P78371 535 aaKnown RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 MRPS6P82932 125 aaKnown RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 NTRK3Q16288 839 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 FBXO47Q5MNV8 452 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 NIPA1Q7RTP0 329 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 PLPPR4Q7Z2D5 763 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 REXO1Q8N1G1 1221 aaKnown RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 FBXO22Q8NEZ5 403 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 UHRF1Q96T88 793 aaPredicted RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 NCOA5Q9HCD5 579 aaKnown RBP15.84■□□□□ 0.13
LINC00339-211ENST00000641009 C6orf50Q9HD87 102 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 LMCD1Q9NZU5 365 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 POTEB3A0JP26 581 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 CYP3A4P08684 503 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 BMP1P13497 986 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 PSMA5P28066 241 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 TMEM62Q0P6H9 643 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 AAK1Q2M2I8 961 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 POTEBQ6S5H4 581 aa15.84■□□□□ 0.13
LINC00339-211ENST00000641009 RASGRP4Q8TDF6 673 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms