RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 AP1ARQ63HQ0 302 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 ANKS4BQ8N8V4 417 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 SLC44A5Q8NCS7 719 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 ANKS1AQ92625 1134 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 KLHL29Q96CT2 875 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 TMEM110-MUSTN1A8MSY1 372 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PTK2Q05397 1052 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 MAN2A1Q16706 1144 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PEX26Q7Z412 305 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 KCNK18Q7Z418 384 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 CDK5RAP3Q96JB5 506 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 IRAK4Q9NWZ3 460 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 ZMYND8Q9ULU4 1186 aaPredicted RBP14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PTPN22Q9Y2R2 807 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 SLC9A1P19634 815 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PRDX5P30044 214 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 MAP2K1Q02750 393 aaPredicted RBP14.99□□□□□ -0.01
SCARB2-227ENST00000640957 SLC29A2Q14542 456 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 NAB2Q15742 525 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 TMC3Q7Z5M5 1100 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PAIP2Q9BPZ3 127 aaKnown RBP14.99□□□□□ -0.01
SCARB2-227ENST00000640957 KCNK9Q9NPC2 374 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 OSGEPQ9NPF4 335 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
SCARB2-227ENST00000640957 F8VZ95 297 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 GNPATO15228 680 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 NOL4O94818 638 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 ITIH3Q06033 890 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 PFKFB3Q16875 520 aaPredicted RBP14.98□□□□□ -0.01
SCARB2-227ENST00000640957 TRPM8Q7Z2W7 1104 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 CCDC50Q8IVM0 306 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 CD302Q8IX05 232 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 CPSF2Q9P2I0 782 aaKnown RBP14.98□□□□□ -0.01
SCARB2-227ENST00000640957 MYH2Q9UKX2 1941 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 ASTE1Q2TB18 679 aaPredicted RBP14.98□□□□□ -0.01
SCARB2-227ENST00000640957 ZNF662Q6ZS27 426 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 PLA2G12BQ9BX93 195 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 TMOD4Q9NZQ9 345 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
SCARB2-227ENST00000640957 GNAT2P19087 354 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 ZNF572Q7Z3I7 529 aaPredicted RBP14.98□□□□□ -0.01
SCARB2-227ENST00000640957 SEMA4AQ9H3S1 761 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 TBK1Q9UHD2 729 aa14.98□□□□□ -0.01
SCARB2-227ENST00000640957 A0A1B0GVG6 124 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 ABL2P42684 1182 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 TUBP50607 506 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 TAF11Q15544 211 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 DCAF17Q5H9S7 520 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-227ENST00000640957 LONP2Q86WA8 852 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 UBA5Q9GZZ9 404 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 TCP11X1B4DZS4 312 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 RGS16O15492 202 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-227ENST00000640957 TFAP4Q01664 338 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 NUGGCQ68CJ6 796 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-227ENST00000640957 CCDC84Q86UT8 332 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-227ENST00000640957 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
SCARB2-227ENST00000640957 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 ZNF652Q9Y2D9 606 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 MARCH6O60337 910 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 GRIK3Q13003 919 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 DRP2Q13474 957 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 MREGQ8N565 214 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 FBXO25Q8TCJ0 367 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 FMO2Q99518 471 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 IKZF4Q9H2S9 585 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 BCAS3Q9H6U6 928 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 PCDHA4Q9UN74 947 aa14.97□□□□□ -0.01
SCARB2-227ENST00000640957 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 NAPAP54920 295 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 ERMARDQ5T6L9 678 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 CNNM4Q6P4Q7 775 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 SV2BQ7L1I2 683 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
SCARB2-227ENST00000640957 U2AF1L4Q8WU68 220 aaKnown RBP14.96□□□□□ -0.01
SCARB2-227ENST00000640957 DDX12PQ92771 950 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 TMEM237Q96Q45 408 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 ERVK-5Q9HDB9 667 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 NOP53Q9NZM5 478 aaKnown RBP14.96□□□□□ -0.01
SCARB2-227ENST00000640957 CTNNAL1Q9UBT7 734 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
SCARB2-227ENST00000640957 A0A1W2PQJ5 194 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 PGRMC1O00264 195 aaKnown RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 GH1P01241 217 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 TNFRSF8P28908 595 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 ASIC2Q16515 512 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 ZNF34Q8IZ26 560 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 MRRFQ96E11 262 aaKnown RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 OSBPL1AQ9BXW6 950 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 FAM129AQ9BZQ8 928 aa14.96□□□□□ -0.02
SCARB2-227ENST00000640957 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 NKX1-2Q9UD57 310 aaPredicted RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 UTP11Q9Y3A2 253 aaKnown RBP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.96□□□□□ -0.02
SCARB2-227ENST00000640957 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms