RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 RBL2Q08999 1139 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 NR5A1Q13285 461 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 ADALQ6DHV7 355 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 GALNT17Q6IS24 598 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 TRAF7Q6Q0C0 670 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 TMCO2Q7Z6W1 182 aaPredicted RBP13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 GAS2L3Q86XJ1 694 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 ARNTL2Q8WYA1 636 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 RIOX1Q9H6W3 641 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 JMJD4Q9H9V9 463 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 SEC63Q9UGP8 760 aaKnown RBP13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 DDX41Q9UJV9 622 aaKnown RBP13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 NBNO60934 754 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 BAIAP3O94812 1187 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 WDR5P61964 334 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 GRB10Q13322 594 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 PTPAQ15257 358 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 STXBP2Q15833 593 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 SLC35G1Q2M3R5 365 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 CAGE1Q8TC20 777 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 MRPS27Q92552 414 aaKnown RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 WNT8BQ93098 351 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 RMDN3Q96TC7 470 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 BARHL2Q9NY43 387 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 DACT1Q9NYF0 836 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 NOD1Q9Y239 953 aa13.46□□□□□ -0.25
ERGIC3-220ENST00000640748 TRIP12Q14669 1992 aaPredicted RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 STXBP3O00186 592 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HAS3O00219 553 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 PPP1R11O60927 126 aaPredicted RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 RGS20O76081 388 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 CXCL10P02778 98 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 CKBP12277 381 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HOXD8P13378 290 aaPredicted RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 SELPP16109 830 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 EIF2AK2P19525 551 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HSD17B4P51659 736 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 DEFB103AP81534 67 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 GHRHRQ02643 423 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HIC1Q14526 733 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 NPY5RQ15761 445 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 WWC2Q6AWC2 1192 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 LRRC8DQ7L1W4 858 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HEATR3Q7Z4Q2 680 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 PXMP2Q9NR77 195 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 PCDHA4Q9UN74 947 aa13.45□□□□□ -0.26
ERGIC3-220ENST00000640748 GTPBP6O43824 516 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 TLL1O43897 1013 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 CUTAO60888 179 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 NR1I2O75469 434 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 BMP15O95972 392 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 F2P00734 622 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 NR3C2P08235 984 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 ZNF286BP0CG31 522 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 TOB1P50616 345 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 NAPAP54920 295 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 MBTPS1Q14703 1052 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 SKIV2LQ15477 1246 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 DGKDQ16760 1214 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 AAK1Q2M2I8 961 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 FBXO11Q86XK2 927 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 HOMER1Q86YM7 354 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 PPTC7Q8NI37 304 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 MTMR8Q96EF0 704 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 PIGSQ96S52 555 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 TNMDQ9H2S6 317 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
ERGIC3-220ENST00000640748 CMA1P23946 247 aa13.43□□□□□ -0.26
ERGIC3-220ENST00000640748 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms