RNA–Protein interactions for RNA: ENST00000640511.1

SPIN3-241, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-241ENST00000640511 PARP6Q2NL67 630 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 CCDC152Q4G0S7 254 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 KRT40Q6A162 431 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
SPIN3-241ENST00000640511 GATA6Q92908 595 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 GSDMAQ96QA5 445 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 N6AMT1Q9Y5N5 214 aa12.78□□□□□ -0.36
SPIN3-241ENST00000640511 CFAP157Q5JU67 520 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 KLC3Q6P597 504 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 MAP7D3Q8IWC1 876 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 CCDC134Q9H6E4 229 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 ZNF711Q9Y462 761 aa12.77□□□□□ -0.36
SPIN3-241ENST00000640511 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.77□□□□□ -0.36
SPIN3-241ENST00000640511 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 RAD21O60216 631 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 CYP1A1P04798 512 aaPredicted RBP12.77□□□□□ -0.37
SPIN3-241ENST00000640511 PYGMP11217 842 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 PTPREP23469 700 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 NFKBIAP25963 317 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 MMP13P45452 471 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 HPCAP84074 193 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 GRIN1Q05586 938 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 FITM2Q8N6M3 262 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 DHTKD1Q96HY7 919 aaPredicted RBP12.77□□□□□ -0.37
SPIN3-241ENST00000640511 PCDHA13Q9Y5I0 950 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 O00370 1275 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 UNC5CO95185 931 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 EIF3BP55884 814 aaKnown RBP12.77□□□□□ -0.37
SPIN3-241ENST00000640511 CDK17Q00537 523 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
SPIN3-241ENST00000640511 KRT26Q7Z3Y9 468 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 UTP4Q969X6 686 aaKnown RBP12.77□□□□□ -0.37
SPIN3-241ENST00000640511 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
SPIN3-241ENST00000640511 DYTNA2CJ06 578 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 GRID2IPA4D2P6 1211 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 LMNAP02545 664 aaKnown RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ECHS1P30084 290 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 RCN1Q15293 331 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 CCDC6Q16204 474 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 KLHL7Q8IXQ5 586 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 NME8Q8N427 588 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 OSBPL10Q9BXB5 764 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 DCLRE1BQ9H816 532 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 RABL2AQ9UBK7 228 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 BOLA2-SMG1P6H3BVE0 249 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 OAS1P00973 400 aaKnown RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 GNAT2P19087 354 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 IFNAR2P48551 515 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 NEK2P51955 445 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 GPSM2P81274 684 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 LIN52Q52LA3 116 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 ZNF394Q53GI3 561 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 DDX21Q9NR30 783 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 TXLNGQ9NUQ3 528 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 FBXO2Q9UK22 296 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-241ENST00000640511 MYH10P35580 1976 aa12.76□□□□□ -0.37
SPIN3-241ENST00000640511 MST1RQ04912 1400 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 ZNF263O14978 683 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 ADARP55265 1226 aaKnown RBP12.75□□□□□ -0.37
SPIN3-241ENST00000640511 RNASELQ05823 741 aaKnown RBP12.75□□□□□ -0.37
SPIN3-241ENST00000640511 TRIM29Q14134 588 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
SPIN3-241ENST00000640511 SNX27Q96L92 541 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 CENPOQ9BU64 300 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 MYH7BA7E2Y1 1941 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 PCDH11XQ9BZA7 1347 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 SIGLEC16A6NMB1 481 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 NAT2P11245 290 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 GM2AP17900 193 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 WASHC2DQ5SRD0 308 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 SLC2A7Q6PXP3 512 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 PROSER2Q86WR7 435 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-241ENST00000640511 AGGF1Q8N302 714 aaeCLIP12.75□□□□□ -0.37
SPIN3-241ENST00000640511 USP33Q8TEY7 942 aa12.75□□□□□ -0.37
SPIN3-241ENST00000640511 SH3TC2Q8TF17 1288 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms