RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TAF4BQ92750 862 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 INPP4AQ96PE3 977 aaPredicted RBP18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 LUC7LQ9NQ29 371 aaKnown RBP18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 HDAC9Q9UKV0 1011 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 PCDHA2Q9Y5H9 948 aa18.16■□□□□ 0.5
HNRNPU-228ENST00000640306 NT5C2P49902 561 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 ARSHQ5FYA8 562 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 EFCAB13Q8IY85 973 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 KCTD10Q9H3F6 313 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 SEC24CP53992 1094 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 CACNB3P54284 484 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 PRR16Q569H4 304 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 ZNF772Q68DY9 489 aaPredicted RBP18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 PIK3R5Q8WYR1 880 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
HNRNPU-228ENST00000640306 CETN3O15182 167 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 CLIC2O15247 247 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 RPS6KA1Q15418 735 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 CEP85LQ5SZL2 805 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 EDEM3Q9BZQ6 932 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 GANQ9H2C0 597 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 TAF1LQ8IZX4 1826 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 SFI1A8K8P3 1242 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 RSPH10B2B2RC85 870 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 ZBTB5O15062 677 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 RSPH10BP0C881 870 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 FBXW10Q5XX13 1052 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 PCDHA1Q9Y5I3 950 aa18.14■□□□□ 0.49
HNRNPU-228ENST00000640306 TULP1O00294 542 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 MYBP10242 640 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 IL1R1P14778 569 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 KCNA1Q09470 495 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 GBP6Q6ZN66 633 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 SFR1Q86XK3 245 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 USP38Q8NB14 1042 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 KAT2BQ92831 832 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 CEP63Q96MT8 703 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 NT5C3AQ9H0P0 336 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 AJAP1Q9UKB5 411 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 PLAAQ9Y263 795 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 ERLIN2O94905 339 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 APBA3O96018 575 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 SNHG28P0DPA3 235 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 ERVK-9P63128 1117 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 TCP10Q12799 353 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 USH1GQ495M9 461 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 GLE1Q53GS7 698 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 ZNF713Q8N859 430 aaPredicted RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 NUCKS1Q9H1E3 243 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 USP40Q9NVE5 1235 aa18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
HNRNPU-228ENST00000640306 A0A087WUV0 522 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 UCHL3P15374 230 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 CASP4P49662 377 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 GABPAQ06546 454 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 QRICH1Q2TAL8 776 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 EPB41P11171 864 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 NR1D1P20393 614 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 NFIAQ12857 509 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 CDC37Q16543 378 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 DOK7Q18PE1 504 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 CATSPER3Q86XQ3 398 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 ZFPM1Q8IX07 1006 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 P2RX7Q99572 595 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 ARMCX3Q9UH62 379 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 PCDHB13Q9Y5F0 798 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 GAKO14976 1311 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 GYS1P13807 737 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 SHMT1P34896 483 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 NOVP48745 357 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 IRF2BP2Q7Z5L9 587 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 SYN2Q92777 582 aaPredicted RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 REEP2Q9BRK0 252 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 ANO3Q9BYT9 981 aa18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 DHX36Q9H2U1 1008 aaKnown RBP18.12■□□□□ 0.49
HNRNPU-228ENST00000640306 MYH7BA7E2Y1 1941 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 KDM3AQ9Y4C1 1321 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 BACH1O14867 736 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 ITGA4P13612 1032 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 EXOC3L4Q17RC7 722 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 NAA35Q5VZE5 725 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 ALKBH5Q6P6C2 394 aaKnown RBP18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 ADAT2Q7Z6V5 191 aaKnown RBP18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 RUBCNQ92622 972 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 AIPL1Q9NZN9 384 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 AKAP3O75969 853 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 GNA14O95837 355 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 RXRBP28702 533 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 TNFRSF8P28908 595 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms