RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 STK32AQ8WU08 396 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 INTS4Q96HW7 963 aaKnown RBP6.65□□□□□ -1.34
NECAP1-222ENST00000640072 GDAP1L1Q96MZ0 367 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 ZSWIM6Q9HCJ5 1215 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 WDR35Q9P2L0 1181 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 AGTPBP1Q9UPW5 1226 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 INPP5FQ9Y2H2 1132 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 TMX2Q9Y320 296 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 ATXN2Q99700 1313 aaKnown RBP6.65□□□□□ -1.34
NECAP1-222ENST00000640072 DPPA5A6NC42 116 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 PALM3A6NDB9 673 aaPredicted RBP6.65□□□□□ -1.35
NECAP1-222ENST00000640072 RARSP54136 660 aaKnown RBP6.65□□□□□ -1.35
NECAP1-222ENST00000640072 KRT85P78386 507 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 GSTO1P78417 241 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 PPA1Q15181 289 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 WSCD2Q2TBF2 565 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 YTHDF3Q7Z739 585 aaKnown RBP6.65□□□□□ -1.35
NECAP1-222ENST00000640072 C7orf61Q8IZ16 206 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC63Q8NA47 563 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 WDR60Q8WVS4 1066 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 HAUS1Q96CS2 278 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 RUNDC3BQ96NL0 473 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 SNCAIPQ9Y6H5 919 aa6.65□□□□□ -1.35
NECAP1-222ENST00000640072 STX6O43752 255 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ATP6V1G2O95670 118 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SFTPCP11686 197 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 S100A1P23297 94 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CCT6AP40227 531 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 GNAQP50148 359 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ATP1A2P50993 1020 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC153Q494R4 210 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 RASEFQ8IZ41 740 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 TOR1AIP2Q8NFQ8 470 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 RFWD2Q8NHY2 731 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CDKL2Q92772 493 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HIC2Q96JB3 615 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SIKE1Q9BRV8 207 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CCSER1Q9C0I3 900 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 C8orf4Q9NR00 106 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CHIC2Q9UKJ5 165 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 UHRF1BP1LA0JNW5 1464 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SAMD9Q5K651 1589 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 IFT140Q96RY7 1462 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HFM1A2PYH4 1435 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 BLMP54132 1417 aaPredicted RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CCDC166P0CW27 439 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 GALNSP34059 522 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PPP1R2P41236 205 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HDGFP51858 240 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 B2MP61769 119 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MRPS15P82914 257 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 DNM1Q05193 864 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 NFE2L1Q14494 772 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SETMARQ53H47 684 aaPredicted RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PRPF38BQ5VTL8 546 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PPP1R2P3Q6NXS1 205 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MAP7D3Q8IWC1 876 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MTMR14Q8NCE2 650 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PLIN2Q99541 437 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HNRNPABQ99729 332 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PLVAPQ9BX97 442 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 UPF3BQ9BZI7 483 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PIDD1Q9HB75 910 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 KCNQ5Q9NR82 932 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PCMTD2Q9NV79 361 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 TRAF3IP3Q9Y228 551 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 GMEB1Q9Y692 573 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HNRNPCL2B2RXH8 293 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 E7EVH7 732 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ASAP2O43150 1006 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HNRNPCL1O60812 293 aaKnown RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SIN3BO75182 1162 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MYL6BP14649 208 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 IDUAP35475 653 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 GGCXP38435 758 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SULT1E1P49888 294 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 BPIFB4P59827 614 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 USP46P62068 366 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 VSNL1P62760 191 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 RBL2Q08999 1139 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 VAC14Q08AM6 782 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MCF2L2Q86YR7 1114 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SPARTQ8N0X7 666 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ZNF540Q8NDQ6 660 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 LEO1Q8WVC0 666 aaPredicted RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CASP10Q92851 521 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 MPHOSPH9Q99550 1183 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 SYNDIG1Q9H7V2 258 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 CNTN3Q9P232 1028 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 RASAL2Q9UJF2 1139 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 PNMA8BQ9ULN7 279 aaPredicted RBP6.64□□□□□ -1.35
NECAP1-222ENST00000640072 ZNF148Q9UQR1 794 aa6.64□□□□□ -1.35
NECAP1-222ENST00000640072 HTR3EA5X5Y0 456 aa6.63□□□□□ -1.35
NECAP1-222ENST00000640072 PSMD14O00487 310 aa6.63□□□□□ -1.35
NECAP1-222ENST00000640072 YKT6O15498 198 aa6.63□□□□□ -1.35
NECAP1-222ENST00000640072 ZBTB14O43829 449 aa6.63□□□□□ -1.35
NECAP1-222ENST00000640072 DGKIO75912 1065 aa6.63□□□□□ -1.35
NECAP1-222ENST00000640072 PFKPQ01813 784 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms