RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 ZYXQ15942 572 aaKnown RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 CFAP58Q5T655 872 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 TRIM59Q8IWR1 403 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 DDX47Q9H0S4 455 aaKnown RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 EPHB4P54760 987 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 NNTQ13423 1086 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 TAF4BQ92750 862 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 DNAJC18Q9H819 358 aa13.69□□□□□ -0.22
SPIN3-232ENST00000639956 DDX60LQ5H9U9 1706 aaKnown RBP13.69□□□□□ -0.22
SPIN3-232ENST00000639956 MYH1P12882 1939 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 FAM86B1E9PN63 330 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 AKAP3O75969 853 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 GFPT2O94808 682 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 HLA-DOAP06340 250 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 ARHGAP4P98171 946 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 SLC18A3Q16572 532 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 PPP4R3AQ6IN85 833 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 ARMCX3Q9UH62 379 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 COG2Q14746 738 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 KCTD10Q9H3F6 313 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 GAKO14976 1311 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 UBAP1LF5GYI3 381 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 ITGA4P13612 1032 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 SEC24CP53992 1094 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 PSMD2Q13200 908 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 NAB2Q15742 525 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 TPH2Q8IWU9 490 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 U2AF1L4Q8WU68 220 aaKnown RBP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 ZNF622Q969S3 477 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPIN3-232ENST00000639956 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
SPIN3-232ENST00000639956 SSU72P8A0A1W2PR75 194 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 UCHL3P15374 230 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 CLK2P49760 499 aaKnown RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 PDE4CQ08493 712 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 RPS6KA1Q15418 735 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 EXOC3L4Q17RC7 722 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 CEP85LQ5SZL2 805 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 IFT20Q8IY31 132 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 NT5C3AQ9H0P0 336 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 SCAF8Q9UPN6 1271 aaKnown RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 ZNF233A6NK53 670 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 DDX39AO00148 427 aaKnown RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 LCA5LO95447 670 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 GIT2Q14161 759 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 VPS72Q15906 364 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
SPIN3-232ENST00000639956 LRRC27Q9C0I9 530 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 NAV1Q8NEY1 1877 aa13.67□□□□□ -0.22
SPIN3-232ENST00000639956 SPDYE3A6NKU9 549 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 EML1O00423 815 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 MEIS2O14770 477 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 CFBP00751 764 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
SPIN3-232ENST00000639956 HOXD13P35453 343 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 ARHGAP44Q17R89 818 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 APOBEC3HQ6NTF7 200 aaKnown RBP13.66□□□□□ -0.22
SPIN3-232ENST00000639956 ELMO3Q96BJ8 720 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
SPIN3-232ENST00000639956 OSGEPQ9NPF4 335 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 PJA2O43164 708 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 BBOX1O75936 387 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 TRIM49P0CI25 452 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 TRIM49CP0CI26 452 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 CYP2J2P51589 502 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 PROM2Q8N271 834 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
SPIN3-232ENST00000639956 GANQ9H2C0 597 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 GCNT4Q9P109 453 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 AMACRQ9UHK6 382 aa13.66□□□□□ -0.22
SPIN3-232ENST00000639956 IGKV6D-41A0A0C4DH26 115 aa13.65□□□□□ -0.22
SPIN3-232ENST00000639956 F5H6K3 240 aa13.65□□□□□ -0.22
SPIN3-232ENST00000639956 OPA1O60313 960 aa13.65□□□□□ -0.22
SPIN3-232ENST00000639956 LRRN2O75325 713 aa13.65□□□□□ -0.22
SPIN3-232ENST00000639956 TRIM37O94972 964 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms