RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SLC35F6Q8N357 371 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
TRIM3-215ENST00000639856 PURBQ96QR8 312 aaKnown RBP16.7■□□□□ 0.26
TRIM3-215ENST00000639856 TUBB2BQ9BVA1 445 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 ZNHIT6Q9NWK9 470 aaKnown RBP16.7■□□□□ 0.26
TRIM3-215ENST00000639856 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 ITGB5P18084 799 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 DSG3P32926 999 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 EPHX2P34913 555 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 PSMC6P62333 389 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 GHRHRQ02643 423 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 ZCWPW2Q504Y3 356 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 LRCH2Q5VUJ6 765 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 SLC5A5Q92911 643 aa16.7■□□□□ 0.26
TRIM3-215ENST00000639856 CHMP2AO43633 222 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 PSMD10O75832 226 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CYP11B2P19099 503 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 NSMFQ6X4W1 530 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CATSPERGQ6ZRH7 1159 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 RSRC2Q7L4I2 434 aaKnown RBP16.69■□□□□ 0.26
TRIM3-215ENST00000639856 GPBP1Q86WP2 473 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 TAAR1Q96RJ0 339 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 ZMYND15Q9H091 742 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 RNF146Q9NTX7 359 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CDC23Q9UJX2 597 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 NPHP3-ACAD11A0A0J9YXS1 232 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 RPA1P27694 616 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CDK17Q00537 523 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 FKBP3Q00688 224 aaKnown RBP16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-215ENST00000639856 COG2Q14746 738 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 GPR162Q16538 588 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
TRIM3-215ENST00000639856 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 HAUS4Q9H6D7 363 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 RGL1Q9NZL6 768 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-215ENST00000639856 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 SIK3Q9Y2K2 1263 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 PCDHA2Q9Y5H9 948 aa16.69■□□□□ 0.26
TRIM3-215ENST00000639856 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 CYLC1P35663 651 aaPredicted RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 CLCN6P51797 869 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 SLC12A3P55017 1021 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 KRT83P78385 493 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 TMEM132BQ14DG7 1078 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 TREML2Q5T2D2 321 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 ZNF662Q6ZS27 426 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 CCDC170Q8IYT3 715 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 GPR161Q8N6U8 529 aaKnown RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 EIF2AK1Q9BQI3 630 aaKnown RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 MXRA8Q9BRK3 442 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 ZNF577Q9BSK1 485 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 ARGLU1Q9NWB6 273 aaPredicted RBP16.68■□□□□ 0.26
TRIM3-215ENST00000639856 PKD2L1Q9P0L9 805 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 STK24Q9Y6E0 443 aa16.68■□□□□ 0.26
TRIM3-215ENST00000639856 SPDYE16A6NNV3 312 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 GAS7O60861 476 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 FDX1P10109 184 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 HERVK_113P62684 666 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 RNF207Q6ZRF8 634 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 NHEJ1Q9H9Q4 299 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 CSADQ9Y600 493 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 FRMD3A2A2Y4 597 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 PEX10O60683 326 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 HNRNPH3P31942 346 aaKnown RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 MRPS9P82933 396 aaKnown RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 SETQ01105 290 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 CTTNQ14247 550 aaKnown RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 ARSHQ5FYA8 562 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 HERC4Q5GLZ8 1057 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
TRIM3-215ENST00000639856 SRGAP1Q7Z6B7 1085 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 RABGGTAQ92696 567 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 GOLGA1Q92805 767 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 PLAGL2Q9UPG8 496 aa16.67■□□□□ 0.26
TRIM3-215ENST00000639856 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 EIF3CLB5ME19 914 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 IPO5O00410 1097 aaKnown RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 TRAF5O00463 557 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 KIF20AO95235 890 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 PPP2R5CQ13362 524 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
TRIM3-215ENST00000639856 TEX35Q5T0J7 233 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
TRIM3-215ENST00000639856 EIF3CQ99613 913 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms