RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 DPF2Q92785 391 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 NDNQ99608 321 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 SIKE1Q9BRV8 207 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 THRAP3Q9Y2W1 955 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 DPPA5A6NC42 116 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 SMAPO00193 183 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 TFRCP02786 760 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ANTXR2P58335 489 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ST3GAL1Q11201 340 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 CFAP221Q4G0U5 840 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 EMBQ6PCB8 327 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ZC3H18Q86VM9 953 aaKnown RBP6.16□□□□□ -1.42
SCARB2-218ENST00000639715 MAPKAPK5Q8IW41 473 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 EPSTI1Q96J88 318 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 TUBGCP2Q9BSJ2 902 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 THAP9Q9H5L6 903 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 ATXN10Q9UBB4 475 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 RASAL2Q9UJF2 1139 aa6.16□□□□□ -1.42
SCARB2-218ENST00000639715 MFAP3LO75121 409 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 FAM13AO94988 1023 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CHGBP05060 677 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ATP2B4P23634 1241 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CTNNA1P35221 906 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 RAPGEF1Q13905 1077 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ANKRD20A2Q5SQ80 823 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ANKRD20A1Q5TYW2 823 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ANKRD20A3Q5VUR7 823 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 INTS8Q75QN2 995 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 GRAMD1CQ8IYS0 662 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 AGAP11Q8TF27 550 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ARHGEF2Q92974 986 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 STMN2Q93045 179 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 TEKT1Q969V4 418 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ELAC2Q9BQ52 826 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CARD9Q9H257 536 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 GPCPD1Q9NPB8 672 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 STK17AQ9UEE5 414 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 RABL2BQ9UNT1 228 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 DLG5Q8TDM6 1919 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CALUO43852 315 aaPredicted RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 EPB41P11171 864 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CCNE1P24864 410 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CASP7P55210 303 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 DYNLL1P63167 89 aaKnown RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 GUCY2DQ02846 1103 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 ARID5AQ03989 594 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 HERC4Q5GLZ8 1057 aaPredicted RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 SFMBT2Q5VUG0 894 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 NUGGCQ68CJ6 796 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 SPATA24Q86W54 205 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 MYOCDQ8IZQ8 938 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 SMC1BQ8NDV3 1235 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 P2RX5Q93086 422 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 LRRC45Q96CN5 670 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 NAP1L3Q99457 506 aaPredicted RBP6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CENPKQ9BS16 269 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 PREBQ9HCU5 417 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 HPS5Q9UPZ3 1129 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CD2APQ9Y5K6 639 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 AKAP12Q02952 1782 aa6.15□□□□□ -1.42
SCARB2-218ENST00000639715 CCT8L1PA6NM43 557 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 SHOX2O60902 331 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 PRPF6O94906 941 aaKnown RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 MLH1P40692 756 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 RFC5P40937 340 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 TMED10P49755 219 aaKnown RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ASIC2Q16515 512 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ZNF280DQ6N043 979 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 CRELD2Q6UXH1 353 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 METTL16Q86W50 562 aaKnown RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 C2CD5Q86YS7 1000 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 WDR60Q8WVS4 1066 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 LZICQ8WZA0 190 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ARHGEF1Q92888 912 aaKnown RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 GPKOWQ92917 476 aaPredicted RBP eCLIP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 DYDC2Q96IM9 177 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 MIS12Q9H081 205 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 FBXO2Q9UK22 296 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 HYOU1Q9Y4L1 999 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ORC4O43929 436 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 RNASE9P60153 205 aaKnown RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ADCY1Q08828 1119 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 RCN2Q14257 317 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 PFKFB3Q16875 520 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 TCP11X2Q5H9J9 407 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 DNAJC14Q6Y2X3 702 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 RRAGAQ7L523 313 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 TRIM50Q86XT4 487 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 ENAHQ8N8S7 591 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 MMS19Q96T76 1030 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 DRC3Q9H069 523 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 STMN4Q9H169 189 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 TSPYL2Q9H2G4 693 aaPredicted RBP6.15□□□□□ -1.43
SCARB2-218ENST00000639715 RIC8AQ9NPQ8 531 aa6.15□□□□□ -1.43
SCARB2-218ENST00000639715 TARSL2A2RTX5 802 aaKnown RBP6.14□□□□□ -1.43
SCARB2-218ENST00000639715 F8W031 263 aaPredicted RBP6.14□□□□□ -1.43
SCARB2-218ENST00000639715 ALOX15P16050 662 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms