RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 FZD9O00144 591 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SPTLC2O15270 562 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 NUAK1O60285 661 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 USP2O75604 605 aaPredicted RBP0.63□□□□□ -2.31
CCDC7-215ENST00000639629 CLK3P49761 638 aaKnown RBP0.63□□□□□ -2.31
CCDC7-215ENST00000639629 PAK2Q13177 524 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 DDR2Q16832 855 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 TAS1R1Q7RTX1 841 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 BRAPQ7Z569 592 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 RALYLQ86SE5 291 aaKnown RBP0.63□□□□□ -2.31
CCDC7-215ENST00000639629 NLGN4XQ8N0W4 816 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 RNF34Q969K3 372 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 KIAA1683Q9H0B3 1180 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SEMA4GQ9NTN9 838 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 FOXJ2Q9P0K8 574 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SIRPGQ9P1W8 387 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 CADPSQ9ULU8 1353 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP0.63□□□□□ -2.31
CCDC7-215ENST00000639629 RASSF10A6NK89 507 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 DIRC3C9JPN6 131 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 WNT1P04628 370 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 NAT2P11245 290 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 PSMD2Q13200 908 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SLC10A6Q3KNW5 377 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 ETV3LQ6ZN32 361 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 WAPLQ7Z5K2 1190 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 LNX2Q8N448 690 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 CRACR2BQ8N4Y2 399 aaPredicted RBP0.63□□□□□ -2.31
CCDC7-215ENST00000639629 P2RY11Q96G91 374 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 MAML3Q96JK9 1138 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SMPD4Q9NXE4 827 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 ZMYM5Q9UJ78 669 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 SRPK3Q9UPE1 567 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 INVSQ9Y283 1065 aa0.63□□□□□ -2.31
CCDC7-215ENST00000639629 MASP2O00187 686 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PJA2O43164 708 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TBX1O43435 398 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 NPHS1O60500 1241 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 EYA4O95677 639 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ABL1P00519 1130 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ITGAVP06756 1048 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 VIL1P09327 827 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 POLR2BP30876 1174 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 GBP1P32455 592 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 LTBRP36941 435 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ARL4AP40617 200 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 WNT3AP56704 352 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ETF1P62495 437 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 MLECQ14165 292 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 SMAD2Q15796 467 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ERCC6L2Q5T890 1561 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FOXB2Q5VYV0 432 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 C11orf87Q6NUJ2 197 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ARMC6Q6NXE6 501 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 DLK2Q6UY11 383 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FAM178BQ8IXR5 827 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FAM109AQ8N4B1 249 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ZBTB38Q8NAP3 1195 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FEZF2Q8TBJ5 459 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 MYEOVQ96EZ4 313 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PWWP2AQ96N64 755 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 MTFR1LQ9H019 292 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 KLC2Q9H0B6 622 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TMPRSS5Q9H3S3 457 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 B4GALT6Q9UBX8 382 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 CSADQ9Y600 493 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PRAMEF27A3QJZ7 478 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 HGSO14964 777 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FZD7O75084 574 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PFKMP08237 780 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ZSCAN20P17040 1043 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 SMAD4Q13485 552 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TMEM145Q8NBT3 493 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 LARP4BQ92615 738 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 IRF2BPLQ9H1B7 796 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TTF2Q9UNY4 1162 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 EPB41L3Q9Y2J2 1087 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ASXL2Q76L83 1435 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TRIM75PA6NK02 468 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FAM90A27PA6NNH2 459 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 TGM5O43548 720 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 NAT1P18440 290 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 GBP2P32456 591 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 FOXG1P55316 489 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 SMAD3P84022 425 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ALDH6A1Q02252 535 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PRR16Q569H4 304 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 KCNK18Q7Z418 384 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 SYT8Q8NBV8 401 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 MDGA1Q8NFP4 955 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 PCDH19Q8TAB3 1148 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 SLC7A6OSQ96CW6 309 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 NEIL1Q96FI4 390 aaPredicted RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 ZC3H10Q96K80 434 aaKnown RBP0.62□□□□□ -2.31
CCDC7-215ENST00000639629 NTMQ9P121 344 aa0.62□□□□□ -2.31
CCDC7-215ENST00000639629 GAGE12BA1L429 117 aa0.61□□□□□ -2.31
CCDC7-215ENST00000639629 GAGE12HA6NDE8 117 aa0.61□□□□□ -2.31
CCDC7-215ENST00000639629 MSCO60682 206 aa0.61□□□□□ -2.31
CCDC7-215ENST00000639629 ZNF623O75123 536 aa0.61□□□□□ -2.31
CCDC7-215ENST00000639629 PLS3P13797 630 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms