RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 NARFQ9UHQ1 456 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 DAPK3O43293 454 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 KIF4AO95239 1232 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 COPB2P35606 906 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 SNAP25P60880 206 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 PSMC6P62333 389 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 UAP1Q16222 522 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-215ENST00000639071 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
NECAP1-215ENST00000639071 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 EDEM3Q9BZQ6 932 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 MTMR4Q9NYA4 1195 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 RNF14Q9UBS8 474 aa10.28□□□□□ -0.76
NECAP1-215ENST00000639071 NOC2LQ9Y3T9 749 aaKnown RBP10.28□□□□□ -0.76
NECAP1-215ENST00000639071 ESYT2A0FGR8 921 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 GCOM1H8Y6P7 765 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 KRIT1O00522 736 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 MED24O75448 989 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 MYZAPP0CAP1 466 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 TAL1P17542 331 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 CYP11B2P19099 503 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 RFC4P35249 363 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 RHBDL3P58872 404 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 PABPC4Q13310 644 aaKnown RBP eCLIP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 METTL13Q8N6R0 699 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 RBM46Q8TBY0 533 aaKnown RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 WHAMMQ8TF30 809 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 LRRC27Q9C0I9 530 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 PSTPIP2Q9H939 334 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 CD209Q9NNX6 404 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 FBXL5Q9UKA1 691 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.76
NECAP1-215ENST00000639071 PCDHA2Q9Y5H9 948 aa10.27□□□□□ -0.76
NECAP1-215ENST00000639071 GPR75-ASB3A0A0A6YYF3 556 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CETN3O15182 167 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CLIC2O15247 247 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 TTI1O43156 1089 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 MYBP10242 640 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 UCHL3P15374 230 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 HSPA9P38646 679 aaKnown RBP10.27□□□□□ -0.77
NECAP1-215ENST00000639071 ARSHQ5FYA8 562 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 ALKBH5Q6P6C2 394 aaKnown RBP10.27□□□□□ -0.77
NECAP1-215ENST00000639071 SLC30A10Q6XR72 485 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 IRF2BP2Q7Z5L9 587 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 SUGP1Q8IWZ8 645 aaKnown RBP10.27□□□□□ -0.77
NECAP1-215ENST00000639071 SYN2Q92777 582 aaPredicted RBP10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CUL5Q93034 780 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CEP63Q96MT8 703 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 TMBIM4Q9HC24 238 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 CD248Q9HCU0 757 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 AIPL1Q9NZN9 384 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 NAGPAQ9UK23 515 aa10.27□□□□□ -0.77
NECAP1-215ENST00000639071 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.77
NECAP1-215ENST00000639071 MYH7BA7E2Y1 1941 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 RSPH10B2B2RC85 870 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 RSPH10BP0C881 870 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 FNTAP49354 379 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CASP4P49662 377 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CYP4A11Q02928 519 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 ZNF844Q08AG5 666 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 KCNA1Q09470 495 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 QPCTQ16769 361 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SHROOM1Q2M3G4 852 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 PEX26Q7Z412 305 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 DAAM2Q86T65 1068 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 MREGQ8N565 214 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 ARHGEF1Q92888 912 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CDCA7Q9BWT1 371 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 ISCUQ9H1K1 167 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SBF2Q86WG5 1849 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 HMGB1P1B2RPK0 211 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 PON1P27169 355 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 USP11P51784 963 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 GRAPQ13588 217 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 EXOC3L4Q17RC7 722 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SPRED3Q2MJR0 410 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 SFR1Q86XK3 245 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 PRPF38AQ8NAV1 312 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 GRAPLQ8TC17 118 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CYFIP2Q96F07 1278 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 JPH2Q9BR39 696 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 TRIM51Q9BSJ1 452 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CNOT8Q9UFF9 292 aaKnown RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 ARMCX3Q9UH62 379 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-215ENST00000639071 BCS1LQ9Y276 419 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 CDK5RAP2Q96SN8 1893 aa10.26□□□□□ -0.77
NECAP1-215ENST00000639071 LOC102724159A0A0B4J2E5 919 aa10.25□□□□□ -0.77
NECAP1-215ENST00000639071 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms