RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 V9GY48 417 aaPredicted RBP19.28■□□□□ 0.68
SMN2-216ENST00000638794 GOLGA8AA7E2F4 631 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 GOLGA8BA8MQT2 603 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 STXBP3O00186 592 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 COL9A1P20849 921 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 ADCY7P51828 1080 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 ZBTB10Q96DT7 871 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 MRPL38Q96DV4 380 aaKnown RBP19.27■□□□□ 0.68
SMN2-216ENST00000638794 ANO3Q9BYT9 981 aa19.27■□□□□ 0.68
SMN2-216ENST00000638794 UBE2ZQ9H832 354 aaPredicted RBP19.27■□□□□ 0.68
SMN2-216ENST00000638794 ATG2AQ2TAZ0 1938 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 TTC3P53804 2025 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 KLF18A0A0U1RQI7 1052 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 CDC45O75419 566 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 FOSP01100 380 aaPredicted RBP19.26■□□□□ 0.67
SMN2-216ENST00000638794 ARP10275 920 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 INSRRP14616 1297 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 ACTR2P61160 394 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 ITGB3BPQ13352 177 aaPredicted RBP19.26■□□□□ 0.67
SMN2-216ENST00000638794 CEP55Q53EZ4 464 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 FBXO47Q5MNV8 452 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 TEX2Q8IWB9 1127 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 TMEM192Q8IY95 271 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
SMN2-216ENST00000638794 SDF4Q9BRK5 362 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 FAM49AQ9H0Q0 323 aaPredicted RBP19.26■□□□□ 0.67
SMN2-216ENST00000638794 AZI2Q9H6S1 392 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 FAM217BQ9NTX9 383 aaPredicted RBP19.26■□□□□ 0.67
SMN2-216ENST00000638794 TMEM260Q9NX78 707 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 BARHL2Q9NY43 387 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 CDY2AQ9Y6F7 541 aa19.26■□□□□ 0.67
SMN2-216ENST00000638794 NFASCO94856 1347 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.25■□□□□ 0.67
SMN2-216ENST00000638794 SMCO2A6NFE2 343 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 RRN3P2A6NIE6 340 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 H3BNC9 293 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 CDC27P30260 824 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 MRPS6P82932 125 aaKnown RBP19.25■□□□□ 0.67
SMN2-216ENST00000638794 GPM6BQ13491 265 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 KRT32Q14532 448 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 PTPROQ16827 1216 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 AGO4Q9HCK5 861 aaKnown RBP19.25■□□□□ 0.67
SMN2-216ENST00000638794 TRPC6Q9Y210 931 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 MYO7AQ13402 2215 aa19.25■□□□□ 0.67
SMN2-216ENST00000638794 SREBF1P36956 1147 aa19.24■□□□□ 0.67
SMN2-216ENST00000638794 CLK2P49760 499 aaKnown RBP19.24■□□□□ 0.67
SMN2-216ENST00000638794 AP3B2Q13367 1082 aa19.24■□□□□ 0.67
SMN2-216ENST00000638794 PLCB4Q15147 1175 aa19.24■□□□□ 0.67
SMN2-216ENST00000638794 TSHZ1Q6ZSZ6 1077 aa19.24■□□□□ 0.67
SMN2-216ENST00000638794 TRAPPC12Q8WVT3 735 aa19.24■□□□□ 0.67
SMN2-216ENST00000638794 RC3H2Q9HBD1 1191 aaKnown RBP19.24■□□□□ 0.67
SMN2-216ENST00000638794 NAP1L2Q9ULW6 460 aaPredicted RBP19.24■□□□□ 0.67
SMN2-216ENST00000638794 MEIS1O00470 390 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 ENPP3O14638 875 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 HMGB1P09429 215 aaKnown RBP19.23■□□□□ 0.67
SMN2-216ENST00000638794 CPA1P15085 419 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 KCNA5P22460 613 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 STAT5BP51692 787 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 RCAN1P53805 252 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 TMEM62Q0P6H9 643 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 TIGD5Q53EQ6 642 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 PLPPR4Q7Z2D5 763 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 FIBCD1Q8N539 461 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 LINC01599Q8WXQ3 324 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 GLT8D2Q9H1C3 349 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 AGO3Q9H9G7 860 aaKnown RBP19.23■□□□□ 0.67
SMN2-216ENST00000638794 RAPGEFL1Q9UHV5 662 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 ADGRA3Q8IWK6 1321 aa19.23■□□□□ 0.67
SMN2-216ENST00000638794 RPLP2P05387 115 aaKnown RBP19.22■□□□□ 0.67
SMN2-216ENST00000638794 LINC00271P0C7V0 271 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 CD52P31358 61 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 CTNNB1P35222 781 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 ADD1P35611 737 aaKnown RBP19.22■□□□□ 0.67
SMN2-216ENST00000638794 FGD1P98174 961 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 LEXMQ3ZCV2 418 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 IER5Q5VY09 327 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 TNPO1Q92973 898 aaKnown RBP19.22■□□□□ 0.67
SMN2-216ENST00000638794 PCDHA2Q9Y5H9 948 aa19.22■□□□□ 0.67
SMN2-216ENST00000638794 KIAA1671Q9BY89 1806 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 POTEB3A0JP26 581 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 FAM86B1E9PN63 330 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 DDX39AO00148 427 aaKnown RBP19.21■□□□□ 0.67
SMN2-216ENST00000638794 ATG7O95352 703 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 CCNE2O96020 404 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 FAM86B2P0C5J1 330 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 ZNF76P36508 570 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 METAP2P50579 478 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMN2-216ENST00000638794 APOBRQ0VD83 1088 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
SMN2-216ENST00000638794 JAKMIP3Q5VZ66 844 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 POTEBQ6S5H4 581 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 C1QTNF1Q9BXJ1 281 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 EPHX3Q9H6B9 360 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 TRPV2Q9Y5S1 764 aa19.21■□□□□ 0.67
SMN2-216ENST00000638794 IGKV6D-21A0A0A0MT36 114 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 C5orf67F2Z3F1 127 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 M0QZ92 97 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms