RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PLA2G4BP0C869 781 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 LRRC57Q8N9N7 239 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 CYFIP2Q96F07 1278 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 BCCIPQ9P287 314 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNIP1-204ENST00000638725 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 NOC2LQ9Y3T9 749 aaKnown RBP11.95□□□□□ -0.5
SNIP1-204ENST00000638725 BTNL10A8MVZ5 291 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 CES2O00748 559 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 CYP11B2P19099 503 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 NR2F2P24468 414 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 NOVP48745 357 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 CASP5P51878 434 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 CUL1Q13616 776 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 DPY19L2P1Q6NXN4 242 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 TPTE2Q6XPS3 522 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 ZNF804AQ7Z570 1209 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 ACTRT1Q8TDG2 376 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 UBLCP1Q8WVY7 318 aaPredicted RBP11.95□□□□□ -0.5
SNIP1-204ENST00000638725 PBKQ96KB5 322 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 NAGPAQ9UK23 515 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 FBXL5Q9UKA1 691 aa11.95□□□□□ -0.5
SNIP1-204ENST00000638725 GPR75-ASB3A0A0A6YYF3 556 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 PGRMC1O00264 195 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 BACH1O14867 736 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 CETN3O15182 167 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ZBTB48P10074 688 aaPredicted RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ITGA4P13612 1032 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 UCHL3P15374 230 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 TMOD1P28289 359 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 RHBDL3P58872 404 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ASPRV1Q53RT3 343 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ALKBH5Q6P6C2 394 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 LRRC45Q96CN5 670 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 NT5C3AQ9H0P0 336 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 JMJD4Q9H9V9 463 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 AMACRQ9UHK6 382 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 KRT18P05783 430 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ACTN3Q08043 901 aaPredicted RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 HYIQ5T013 277 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 C6orf89Q6UWU4 347 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 CCDC91Q7Z6B0 441 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 CCDC13Q8IYE1 715 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 EIF1ADQ8N9N8 165 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 GEMIN8Q9NWZ8 242 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 CNOT8Q9UFF9 292 aaKnown RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 AJAP1Q9UKB5 411 aaPredicted RBP11.94□□□□□ -0.5
SNIP1-204ENST00000638725 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
SNIP1-204ENST00000638725 MYH7BA7E2Y1 1941 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 DAPK3O43293 454 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 SLC16A2P36021 539 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 STAT3P40763 770 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 QPCTQ16769 361 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 GPATCH11Q8N954 259 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 ATAD5Q96QE3 1844 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 NHSQ6T4R5 1651 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 KRIT1O00522 736 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 AKR1B1P15121 316 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 IFI16Q16666 785 aaKnown RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 SPRED3Q2MJR0 410 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 PEX26Q7Z412 305 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 CUL5Q93034 780 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 CALR3Q96L12 384 aaKnown RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 MYCBPQ99417 103 aaPredicted RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 LRRC4CQ9HCJ2 640 aa11.93□□□□□ -0.5
SNIP1-204ENST00000638725 NOVA2Q9UNW9 492 aaKnown RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
SNIP1-204ENST00000638725 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 PNMA6FA0A0J9YX94 578 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 GMNCA6NCL1 334 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 SRRM3A6NNA2 597 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 DCDC2CA8MYV0 355 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 TTI1O43156 1089 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 MED24O75448 989 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 PON1P27169 355 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 EDRF1Q3B7T1 1238 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 ARSHQ5FYA8 562 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 DCAF17Q5H9S7 520 aaPredicted RBP11.92□□□□□ -0.5
SNIP1-204ENST00000638725 C10orf76Q5T2E6 689 aa11.92□□□□□ -0.5
SNIP1-204ENST00000638725 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms