RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 USP17L3A6NCW0 530 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 USP17L4A6NCW7 530 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 DCTN3O75935 186 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 ART3Q13508 389 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 USPL1Q5W0Q7 1092 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 PPP1R2P3Q6NXS1 205 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 C4orf50Q6ZRC1 276 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 USP17L1Q7RTZ2 530 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 NUB1Q9Y5A7 615 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 IQANK1A0A1B0GTG1 560 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 LRRC53A6NM62 1247 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 S100BP04271 92 aaPredicted RBP19.92■□□□□ 0.78
SCARB2-213ENST00000638680 TNFAIP1Q13829 316 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 TSC22D3Q99576 134 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 TLK1Q9UKI8 766 aa19.92■□□□□ 0.78
SCARB2-213ENST00000638680 TTC37Q6PGP7 1564 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 A0A0G2JND7 137 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 TFDP1Q14186 410 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 PCGF5Q86SE9 256 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 CEP72Q9P209 647 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 PACSIN2Q9UNF0 486 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 DIS3Q9Y2L1 958 aaKnown RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 XDHP47989 1333 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 H0Y3Z8 333 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 CHUKO15111 745 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 DNAJC8O75937 253 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 INPP1P49441 399 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 PPP4R3CPQ6ZMV5 832 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 APOL6Q9BWW8 343 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 ASAP1Q9ULH1 1129 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 ANO9A1A5B4 782 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 PODXLO00592 558 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 CRKLP46109 303 aaKnown RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 MAGOHP61326 146 aaKnown RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 KIF22Q14807 665 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 ATG16L1Q676U5 607 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 RHOT2Q8IXI1 618 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 TRAIPQ9BWF2 469 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 HOXA7P31268 230 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 NCAPG2Q86XI2 1143 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 SYT2Q8N9I0 419 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 HDAC6Q9UBN7 1215 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 LRRC23Q53EV4 343 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 ST13P4Q8IZP2 240 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 SKA2Q8WVK7 121 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-213ENST00000638680 CENPKQ9BS16 269 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 SLC38A10Q9HBR0 1119 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 SAYSD1Q9NPB0 183 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 WDR70Q9NW82 654 aa19.91■□□□□ 0.78
SCARB2-213ENST00000638680 ATP7BP35670 1465 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 NCK2O43639 380 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 CEP170P1Q96L14 293 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 GRAMD1BQ3KR37 738 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 NFRKBQ6P4R8 1299 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 FAM149B1Q96BN6 582 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 CCDC138Q96M89 665 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 CD58P19256 250 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 SPARCL1Q14515 664 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 SPOPLQ6IQ16 392 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 ZC3H18Q86VM9 953 aaKnown RBP19.9■□□□□ 0.78
SCARB2-213ENST00000638680 MRFAP1Q9Y605 127 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 LMTK3Q96Q04 1460 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 GOLGA8IPA6NC78 632 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 GOLGA8JA6NMD2 632 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 GDF11O95390 407 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 SLC12A1Q13621 1099 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 FAM47EQ6ZV65 393 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 ZNF579Q8NAF0 562 aaKnown RBP19.9■□□□□ 0.78
SCARB2-213ENST00000638680 SLC7A3Q8WY07 619 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 ZDHHC9Q9Y397 364 aa19.9■□□□□ 0.78
SCARB2-213ENST00000638680 TFAMQ00059 246 aaKnown RBP19.89■□□□□ 0.78
SCARB2-213ENST00000638680 KDM6BO15054 1643 aa19.89■□□□□ 0.78
SCARB2-213ENST00000638680 EEF1B2P24534 225 aaKnown RBP19.89■□□□□ 0.77
SCARB2-213ENST00000638680 PRCPP42785 496 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 CTTNQ14247 550 aaKnown RBP19.89■□□□□ 0.77
SCARB2-213ENST00000638680 HIPK4Q8NE63 616 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 NXF1Q9UBU9 619 aaKnown RBP19.89■□□□□ 0.77
SCARB2-213ENST00000638680 PALM3A6NDB9 673 aaPredicted RBP19.89■□□□□ 0.77
SCARB2-213ENST00000638680 MED7O43513 233 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 LMNAP02545 664 aaKnown RBP19.89■□□□□ 0.77
SCARB2-213ENST00000638680 OSBPL9Q96SU4 736 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 SERPINI1Q99574 410 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ZBTB1Q9Y2K1 713 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ORC6Q9Y5N6 252 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 GMNCA6NCL1 334 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 UNC13DQ70J99 1090 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 LEMD3Q9Y2U8 911 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ESYT3A0FGR9 886 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ARL4AP40617 200 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 NLRP14Q86W24 1093 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 PNMA2Q9UL42 364 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ANGPTL3Q9Y5C1 460 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 ADGRG1Q9Y653 693 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 NEDD4P46934 1319 aa19.89■□□□□ 0.77
SCARB2-213ENST00000638680 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
SCARB2-213ENST00000638680 TTI1O43156 1089 aa19.88■□□□□ 0.77
SCARB2-213ENST00000638680 ACTN3Q08043 901 aaPredicted RBP19.88■□□□□ 0.77
SCARB2-213ENST00000638680 TBC1D10CQ8IV04 446 aa19.88■□□□□ 0.77
SCARB2-213ENST00000638680 TTC17Q96AE7 1141 aa19.88■□□□□ 0.77
SCARB2-213ENST00000638680 GOLGA8CPA6NN73 597 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms