RNA–Protein interactions for RNA: ENST00000638463.1

EGFR-211, Transcript of epidermal growth factor receptor, humanhuman

TSL 5 BASIC

Gene EGFR, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-211ENST00000638463 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
EGFR-211ENST00000638463 GRAMD1AQ96CP6 724 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 TBC1D23Q9NUY8 699 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 ORC6Q9Y5N6 252 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 COL4A3BPQ9Y5P4 624 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 ARHGEF9O43307 516 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 PPM1FP49593 454 aaPredicted RBP11.94□□□□□ -0.5
EGFR-211ENST00000638463 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
EGFR-211ENST00000638463 LRRC36Q1X8D7 754 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 EP400NLQ6ZTU2 488 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 IFNL3Q8IZI9 196 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 RNF34Q969K3 372 aa11.94□□□□□ -0.5
EGFR-211ENST00000638463 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
EGFR-211ENST00000638463 ROBO2Q9HCK4 1378 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 TTC26A0AVF1 554 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 LGALS16A8MUM7 142 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 AFPP02771 609 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 CCDC159P0C7I6 412 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 TMOD1P28289 359 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 CYTH1Q15438 398 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 NOA1Q8NC60 698 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 PLBD2Q8NHP8 589 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 ZNF229Q9UJW7 825 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 GDAQ9Y2T3 454 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 LRRC7Q96NW7 1537 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 ANP32DO95626 131 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 S100BP04271 92 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 PGM1P36871 562 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 CASP2P42575 452 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 BYSLQ13895 437 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 MCUQ8NE86 351 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 PYROXD1Q8WU10 500 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 CCDC124Q96CT7 223 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 POLR3CQ9BUI4 534 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 NIP7Q9Y221 180 aaKnown RBP eCLIP11.93□□□□□ -0.5
EGFR-211ENST00000638463 IGSF1Q8N6C5 1336 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 UBTFL6P0CB48 400 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 AGGF1Q8N302 714 aaeCLIP11.93□□□□□ -0.52e-7■■■■■ 57.7
EGFR-211ENST00000638463 LARP4BQ92615 738 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 ZNF496Q96IT1 587 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 PRMT1Q99873 361 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 ANKRD2Q9GZV1 360 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 SCHIP1Q9P0W5 487 aaPredicted RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 APOBEC2Q9Y235 224 aaKnown RBP11.93□□□□□ -0.5
EGFR-211ENST00000638463 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
EGFR-211ENST00000638463 ZNF185O15231 689 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 ECE1P42892 770 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 TRPC1P48995 793 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 FAM178BQ8IXR5 827 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 ZSCAN10Q96SZ4 725 aaPredicted RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 ING2Q9H160 280 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 C1orf112Q9NSG2 853 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 TRAPPC10P48553 1259 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 PTGISQ16647 500 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 XPO6Q96QU8 1125 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 TRPV6Q9H1D0 765 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 SAYSD1Q9NPB0 183 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 RNF103-CHMP3A0A140T963 221 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 IQANK1A0A1B0GTG1 560 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 IPO5O00410 1097 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 DAB1O75553 588 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 SYF2O95926 243 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 MMP1P03956 469 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CASP1P29466 404 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 RAPH1Q70E73 1250 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CENPUQ71F23 418 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 ARMCX6Q7L4S7 300 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 PROCA1Q8NCQ7 364 aaPredicted RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CHMP2BQ9UQN3 213 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 IGF2BP3O00425 579 aaKnown RBP eCLIP11.92□□□□□ -0.5
EGFR-211ENST00000638463 EXOC5O00471 708 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 ADCY3O60266 1144 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CHN1P15882 459 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 CA8P35219 290 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 NR1H3Q13133 447 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
EGFR-211ENST00000638463 RNPC3Q96LT9 517 aaKnown RBP11.92□□□□□ -0.5
EGFR-211ENST00000638463 ZFATQ9P243 1243 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms