RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PPM1EQ8WY54 764 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 SEPT1Q8WYJ6 367 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 CUL5Q93034 780 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
PNKP-229ENST00000637897 MTIF3Q9H2K0 278 aaKnown RBP8.97□□□□□ -0.97
PNKP-229ENST00000637897 AGO3Q9H9G7 860 aaKnown RBP8.97□□□□□ -0.97
PNKP-229ENST00000637897 ATG2AQ2TAZ0 1938 aa8.96□□□□□ -0.97
PNKP-229ENST00000637897 LOXHD1Q8IVV2 1947 aa8.96□□□□□ -0.97
PNKP-229ENST00000637897 TCF20Q9UGU0 1960 aaKnown RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 ABHD14A-ACY1A0A1B0GW23 586 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 ESYT2A0FGR8 921 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 LINC01553A4QN01 128 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 SPDYE3A6NKU9 549 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 M0R2N6 131 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 NOP56O00567 594 aaKnown RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 CYP3A4P08684 503 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 ACTN1P12814 892 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 SCG2P13521 617 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 INSRRP14616 1297 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 METAP2P50579 478 aaKnown RBP eCLIP8.96□□□□□ -0.98
PNKP-229ENST00000637897 ACTR2P61160 394 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 HTRA4P83105 476 aaPredicted RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 ARHGAP4P98171 946 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 TFF2Q03403 129 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 KRT32Q14532 448 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 LPIN1Q14693 890 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 PLCB4Q15147 1175 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 GRIK4Q16099 956 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 CEP55Q53EZ4 464 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 FAM117BQ6P1L5 589 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 BLOC1S2Q6QNY1 142 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 ABHD15Q6UXT9 468 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 SP7Q8TDD2 431 aaPredicted RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 ARNTL2Q8WYA1 636 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 AIFM3Q96NN9 605 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 RC3H2Q9HBD1 1191 aaKnown RBP8.96□□□□□ -0.98
PNKP-229ENST00000637897 TTC3P53804 2025 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 NFASCO94856 1347 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 EMSYQ7Z589 1322 aa8.96□□□□□ -0.98
PNKP-229ENST00000637897 WDR81Q562E7 1941 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 TLL1O43897 1013 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 REC8O95072 547 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 IFNAR1P17181 557 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 IGFBP4P22692 258 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 ADCY7P51828 1080 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 ERVK-21P61565 698 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 RUFY3Q7L099 469 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 CCDC155Q8N6L0 562 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 GDPD5Q8WTR4 605 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 DNAJB3Q8WWF6 145 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 GJA10Q969M2 543 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 TOP1MTQ969P6 601 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 GAS2L1Q99501 681 aaPredicted RBP8.95□□□□□ -0.98
PNKP-229ENST00000637897 C17orf80Q9BSJ5 609 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 UPF3BQ9BZI7 483 aaKnown RBP8.95□□□□□ -0.98
PNKP-229ENST00000637897 CDHR5Q9HBB8 845 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 JPH1Q9HDC5 661 aaPredicted RBP8.95□□□□□ -0.98
PNKP-229ENST00000637897 GJB4Q9NTQ9 266 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 VPS54Q9P1Q0 977 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 SLC9A2Q9UBY0 812 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 NRCAMQ92823 1304 aa8.95□□□□□ -0.98
PNKP-229ENST00000637897 EVPLQ92817 2033 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 hCG_1984214I3L0E3 225 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 DDX39AO00148 427 aaKnown RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 MAFGO15525 162 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 CAND2O75155 1236 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 PARNO95453 639 aaKnown RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 CTDNEP1O95476 244 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 FOSP01100 380 aaPredicted RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 HMGB1P09429 215 aaKnown RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 GHRP10912 638 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 BMP1P13497 986 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 CIITAP33076 1130 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 PPFIA1Q13136 1202 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 AP3B2Q13367 1082 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 IKBKEQ14164 716 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 FBXO47Q5MNV8 452 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 SYNE3Q6ZMZ3 975 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 ZNF713Q8N859 430 aaPredicted RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 TMEM40Q8WWA1 233 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 CDHR1Q96JP9 859 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 NECAB3Q96P71 396 aaPredicted RBP8.94□□□□□ -0.98
PNKP-229ENST00000637897 RAD9AQ99638 391 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 TMX1Q9H3N1 280 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 ERAP1Q9NZ08 941 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 CDY2AQ9Y6F7 541 aa8.94□□□□□ -0.98
PNKP-229ENST00000637897 ENPP3O14638 875 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 EPB41L2O43491 1005 aaKnown RBP8.93□□□□□ -0.98
PNKP-229ENST00000637897 ZNF862O60290 1169 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 STBD1O95210 358 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 KCNJ6P48051 423 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 KCNQ1P51787 676 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 IGBP1P78318 339 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 TMEM62Q0P6H9 643 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 ST3GAL1Q11201 340 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 B3GNT9Q6UX72 402 aa8.93□□□□□ -0.98
PNKP-229ENST00000637897 NIPA1Q7RTP0 329 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms