RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 CCNE2O96020 404 aa16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 PSAPP07602 524 aa16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 NPY5RQ15761 445 aa16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 TUBE1Q9UJT0 475 aa16.3■□□□□ 0.2
CACNA1A-249ENST00000637777 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 WDR64B1ANS9 1081 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 M0R2N6 131 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 MSH4O15457 936 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 LGR5O75473 907 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 MMP1P03956 469 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 ST3GAL1Q11201 340 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 NR5A1Q13285 461 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 HIC1Q14526 733 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 KRT40Q6A162 431 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 RSPH3Q86UC2 560 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 SERINC5Q86VE9 423 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 SMAP1Q8IYB5 467 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 GJA10Q969M2 543 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 CTAGE1Q96RT6 745 aa16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 LLPHQ9BRT6 129 aaKnown RBP16.29■□□□□ 0.2
CACNA1A-249ENST00000637777 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 RSPH10B2B2RC85 870 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 RSPH10BP0C881 870 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 INSRRP14616 1297 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 PLCB4Q15147 1175 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 Q4G0T1 1027 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 ZNF697Q5TEC3 545 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 ABHD15Q6UXT9 468 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 PLPPR4Q7Z2D5 763 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 CCDC60Q8IWA6 550 aaPredicted RBP16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 HERVK_113Q902F9 699 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 WNT8BQ93098 351 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 LENG9Q96B70 501 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 PCYT2Q99447 389 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 PCDHA10Q9Y5I2 948 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
CACNA1A-249ENST00000637777 RRN3P2A6NIE6 340 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 DHX15O43143 795 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 GCFC2P16383 781 aaKnown RBP16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 KCNJ6P48051 423 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 SLC26A2P50443 739 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 DEFB123Q8N688 67 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 FAM161BQ96MY7 647 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 RIT2Q99578 217 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 FAM49AQ9H0Q0 323 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 DISC1Q9NRI5 854 aa16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 CXXC1Q9P0U4 656 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-249ENST00000637777 TET1Q8NFU7 2136 aa16.27■□□□□ 0.19
CACNA1A-249ENST00000637777 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 FAM205CA6NFA0 338 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 M0QZ92 97 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 SLC37A4O43826 429 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 ATG7O95352 703 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 ATP2B1P20020 1258 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 CYP3A7P24462 503 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 MCM2P49736 904 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 JAK3P52333 1124 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 SMAD3P84022 425 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 Q7L0L9 218 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 TRAPPC12Q8WVT3 735 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 SLC5A5Q92911 643 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 UNC45AQ9H3U1 944 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 MSRAQ9UJ68 235 aa16.26■□□□□ 0.19
CACNA1A-249ENST00000637777 GRXCR1A8MXD5 290 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 HBP1O60381 514 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 BAG4O95429 457 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 HOXC8P31273 242 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 SFNP31947 248 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 RBL2Q08999 1139 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 TRIM71Q2Q1W2 868 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 RUFY4Q6ZNE9 571 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 ATP8B4Q8TF62 1192 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 DNAJB3Q8WWF6 145 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 ZBTB10Q96DT7 871 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 WDR81Q562E7 1941 aa16.25■□□□□ 0.19
CACNA1A-249ENST00000637777 EDIL3O43854 480 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 NBNO60934 754 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 CAND2O75155 1236 aa16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 ATP2A2P16615 1042 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-249ENST00000637777 DNAJB2P25686 324 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms