RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 DNAJC12Q9UKB3 198 aa17.19■□□□□ 0.34
CLN5-218ENST00000637397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
CLN5-218ENST00000637397 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 GRM4Q14833 912 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 AOC3Q16853 763 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 SFR1Q86XK3 245 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 POTEB3A0JP26 581 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 POTECB2RU33 542 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 HNRNPDLO14979 420 aaKnown RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 SORBS3O60504 671 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 TDP2O95551 362 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 ZNF211Q13398 564 aaPredicted RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 POTEBQ6S5H4 581 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 CFAP61Q8NHU2 1237 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 NACC1Q96RE7 527 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 CCSER1Q9C0I3 900 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 PRDM4Q9UKN5 801 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 PPP1R3GB7ZBB8 358 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L15C9J2P7 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L13C9JLJ4 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L11C9JVI0 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L18D6R9N7 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L22D6RA61 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L17D6RBQ6 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L19D6RCP7 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L20D6RJB6 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 GDF11O95390 407 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 MAN1A1P33908 653 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 PPP2R2AP63151 447 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 ADCY2Q08462 1091 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L24Q0WX57 530 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 CTTNQ14247 550 aaKnown RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 USP17L6PQ6QN14 398 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLN5-218ENST00000637397 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 ZBED4O75132 1171 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 MXI1P50539 228 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 DMP1Q13316 513 aaPredicted RBP17.18■□□□□ 0.34
CLN5-218ENST00000637397 PDXDC1Q6P996 788 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
CLN5-218ENST00000637397 PSMD14O00487 310 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 PPP1R37O75864 691 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 KRT14P02533 472 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 TMOD1P28289 359 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 CEP95Q96GE4 821 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 ABCA9Q8IUA7 1624 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 DLGAP5Q15398 846 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 MUM1L1Q5H9M0 696 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 PCDHA6Q9UN73 950 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 PCDHA8Q9Y5H6 950 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 SNAP25P60880 206 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 FBXW10Q5XX13 1052 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 GINS2Q9Y248 185 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 CD44P16070 742 aaKnown RBP17.17■□□□□ 0.34
CLN5-218ENST00000637397 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
CLN5-218ENST00000637397 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
CLN5-218ENST00000637397 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
CLN5-218ENST00000637397 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 ORC4O43929 436 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 RHOBTB3O94955 611 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 LUC7L3O95232 432 aaKnown RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 NR3C1P04150 777 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 CSF1RP07333 972 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 KLK7P49862 253 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 IRAK1P51617 712 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 ERVK-24P63145 666 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 RHOT2Q8IXI1 618 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 DAPK3O43293 454 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 THOC1Q96FV9 657 aaKnown RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN5-218ENST00000637397 GRID2IPA4D2P6 1211 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 EIF3HO15372 352 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN5-218ENST00000637397 PSMD6Q15008 389 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 HADHQ16836 314 aaKnown RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
CLN5-218ENST00000637397 MLXIPLQ9NP71 852 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 L1RE1Q9UN81 338 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 CD163L1Q9NR16 1453 aa17.16■□□□□ 0.34
CLN5-218ENST00000637397 SGK1O00141 431 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 TTBK2Q6IQ55 1244 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 ACCSQ96QU6 501 aa17.15■□□□□ 0.34
CLN5-218ENST00000637397 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms