RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 LSM14BQ9BX40 385 aaKnown RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 ACBD3Q9H3P7 528 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 JADE2Q9NQC1 790 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 OLFML3Q9NRN5 406 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 TYW1Q9NV66 732 aaKnown RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 TSKSQ9UJT2 592 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 IGLV3-22A0A075B6J6 115 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 CLRN2A0PK11 232 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 MACROD2A1Z1Q3 448 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 ENC1O14682 589 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 EPHB6O15197 1021 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 NKRFO15226 690 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLN8-212ENST00000637083 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLN8-212ENST00000637083 ECE1P42892 770 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 RAD51AP2Q09MP3 1159 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 TERF2Q15554 542 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 SFR1Q86XK3 245 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 SMCR8Q8TEV9 937 aaPredicted RBP13.35□□□□□ -0.27
CLN8-212ENST00000637083 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 BHMT2Q9H2M3 363 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 SEL1LQ9UBV2 794 aa13.35□□□□□ -0.27
CLN8-212ENST00000637083 RBAK-RBAKDNI3L0D1 243 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 MEIS1O00470 390 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 FAM13AO94988 1023 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 ASNSP08243 561 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 RHOXF2BP0C7M4 288 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 DPEP1P16444 411 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 PRELPP51888 382 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 PSMC6P62333 389 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 OTOP1Q7RTM1 612 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 NEK9Q8TD19 979 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 FUT8Q9BYC5 575 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 VEZTQ9HBM0 779 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 PLCB1Q9NQ66 1216 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 BZW2Q9Y6E2 419 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 UBE4BO95155 1302 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 RCCD1A6NED2 376 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 ZNF263O14978 683 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 GAS7O60861 476 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 PSMD10O75832 226 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 EPB41P11171 864 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 CAP2P40123 477 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 USP14P54578 494 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 ITIH3Q06033 890 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 KCNH2Q12809 1159 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
CLN8-212ENST00000637083 C10orf76Q5T2E6 689 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 CCDC174Q6PII3 467 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 HSD17B14Q9BPX1 270 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 FGFBP2Q9BYJ0 223 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 DEFB129Q9H1M3 183 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 AIPL1Q9NZN9 384 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
CLN8-212ENST00000637083 MAP2K7O14733 419 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 CYP4A11Q02928 519 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
CLN8-212ENST00000637083 TNIP1Q15025 636 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 EPHA7Q15375 998 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 NFIL3Q16649 462 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 BEND6Q5SZJ8 279 aaPredicted RBP13.33□□□□□ -0.28
CLN8-212ENST00000637083 ZNF771Q7L3S4 317 aaPredicted RBP13.33□□□□□ -0.28
CLN8-212ENST00000637083 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 RUBCNQ92622 972 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 TEKT3Q9BXF9 490 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 ZMYND15Q9H091 742 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 NLRC4Q9NPP4 1024 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 GINM1Q9NU53 330 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 PNMA2Q9UL42 364 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 HYOU1Q9Y4L1 999 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 CNTNAP1P78357 1384 aa13.33□□□□□ -0.28
CLN8-212ENST00000637083 NOL4O94818 638 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 GCNT3O95395 438 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 ANXA13P27216 316 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 ASIC2Q16515 512 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 RINT1Q6NUQ1 792 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 DEFB132Q7Z7B7 95 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
CLN8-212ENST00000637083 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms