RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 NNMTP40261 264 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 PSMC1P62191 440 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 NUDCD3Q8IVD9 361 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 GCNT4Q9P109 453 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 RFX8Q6ZV50 586 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 TBCKQ8TEA7 893 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 TMED1Q13445 227 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 ZNF772Q68DY9 489 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 FANCBQ8NB91 859 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 LARSQ9P2J5 1176 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 PRAMEF22A3QJZ6 481 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 PSAPP07602 524 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 PSMA2P25787 234 aa19.21■□□□□ 0.67
CACNA1A-227ENST00000636549 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.66
CACNA1A-227ENST00000636549 E2F6O75461 281 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 BMP3P12645 472 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 YEATS2Q9ULM3 1422 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 CIITAP33076 1130 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 BBS9Q3SYG4 887 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 MMP19Q99542 508 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 FAM47DPA6NHR8 397 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 BRD2P25440 801 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 PSMC2P35998 433 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 ANKRD40Q6AI12 368 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 RNF207Q6ZRF8 634 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 SLC17A8Q8NDX2 589 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 AMNQ9BXJ7 453 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 HEMGNQ9BXL5 484 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 C6orf203Q9P0P8 240 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 E2F8A0AVK6 867 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 BRD1O95696 1058 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 GRIK1P39086 918 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 PPP3CCP48454 512 aa19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 SOS2Q07890 1332 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-227ENST00000636549 EEF1DP29692 281 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 MED7O43513 233 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 NDUFA8P51970 172 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 SF3B3Q15393 1217 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 KLHL8Q9P2G9 620 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 EPS15L1Q9UBC2 864 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 RFX3P48380 749 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 EN1Q05925 392 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 FLOT2Q14254 428 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 FAM26FQ5R3K3 315 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 FLAD1Q8NFF5 587 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 CACNA2D2Q9NY47 1150 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 PASKQ96RG2 1323 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 STXBP2Q15833 593 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 ARL13BQ3SXY8 428 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 SLC26A7Q8TE54 656 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 XDHP47989 1333 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 ARIH2O95376 493 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 CATSPER3Q86XQ3 398 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 FANCLQ9NW38 375 aa19.19■□□□□ 0.66
CACNA1A-227ENST00000636549 PI16Q6UXB8 463 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 NDUFAF2Q8N183 169 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 CCDC90BQ9GZT6 254 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 PRAMEF18Q5VWM3 479 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ERFP50548 548 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 NLGN1Q8N2Q7 840 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 CARD14Q9BXL6 1004 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 A0A1B0GUA9 196 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ANKRD20A4Q4UJ75 823 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ANKRD20A8PQ5CZ79 823 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ANKRD20A2Q5SQ80 823 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ANKRD20A1Q5TYW2 823 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 TESK2Q96S53 571 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 SP110Q9HB58 689 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ZMYM6O95789 1325 aa19.18■□□□□ 0.66
CACNA1A-227ENST00000636549 ZBED1O96006 694 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 AFPP02771 609 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 SETSIPP0DME0 302 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 ZBTB38Q8NAP3 1195 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 TLR7Q9NYK1 1049 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 OGFRQ9NZT2 677 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 HYOU1Q9Y4L1 999 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 TSPY1Q01534 308 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 E2F5Q15329 346 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 ERO1AQ96HE7 468 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 TDRD3Q9H7E2 651 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 MMP10P09238 476 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 EPB42P16452 691 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 CSE1LP55060 971 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 CERS3Q8IU89 383 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 CDV3Q9UKY7 258 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 FGAP02671 866 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 RAP1GDS1P52306 607 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 CDC37Q16543 378 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 RASIP1Q5U651 963 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 KRT80Q6KB66 452 aa19.17■□□□□ 0.66
CACNA1A-227ENST00000636549 ALKBH2Q6NS38 261 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms