RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TMEM161AQ9NX61 479 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 AKT3Q9Y243 479 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ATRXP46100 2492 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 UBAP1LF5GYI3 381 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 CTTNQ14247 550 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KARSQ15046 597 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 SDE2Q6IQ49 451 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 LRRC31Q6UY01 552 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 NEK8Q86SG6 692 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 HORMAD1Q86X24 394 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 LARGE2Q8N3Y3 721 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KCTD6Q8NC69 237 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ZNF555Q8NEP9 628 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ENGASEQ8NFI3 743 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 OSBPL6Q9BZF3 934 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KIF1BO60333 1816 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 FAM107AO95990 144 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KLHL40Q2TBA0 621 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ANKRD42Q8N9B4 389 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PIK3R5Q8WYR1 880 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PBXIP1Q96AQ6 731 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 CEP95Q96GE4 821 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 HES6Q96HZ4 224 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 KIFC1Q9BW19 673 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 CNOT10Q9H9A5 744 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 RAD18Q9NS91 495 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ZNF148Q9UQR1 794 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 EFCAB5A4FU69 1503 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 RTTNQ86VV8 2226 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 LRRC53A6NM62 1247 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PGM3O95394 542 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PTPN1P18031 435 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 YWHAQP27348 245 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 RAPGEF5Q92565 580 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ERO1AQ96HE7 468 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 GPCPD1Q9NPB8 672 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PSD3Q9NYI0 1048 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 SPACA6W5XKT8 324 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 POLR2DO15514 142 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PPP2R1AP30153 589 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 RNASE9P60153 205 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 PSMC1P62191 440 aaKnown RBP6.44□□□□□ -1.38
SCN1A-212ENST00000636194 ANKRD13DQ6ZTN6 518 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 Q6ZUG5 572 aa6.44□□□□□ -1.38
SCN1A-212ENST00000636194 SPDYE5A6NIY4 337 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 NDUFB5O43674 189 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 SUPT3HO75486 399 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ZNF24P17028 368 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 SURF1Q15526 300 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ADCK5Q3MIX3 580 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 SPDYE7PQ495Y7 208 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 TRAPPC3LQ5T215 181 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ICE2Q659A1 982 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 TMEM132EQ6IEE7 984 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CCNYQ8ND76 341 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 IFT43Q96FT9 208 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CDHR1Q96JP9 859 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ZBTB3Q9H5J0 574 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 NRBP2Q9NSY0 501 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 EVA1BQ9NVM1 165 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CACNA2D2Q9NY47 1150 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ARMCX3Q9UH62 379 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 PNMA3Q9UL41 463 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 INTUQ9ULD6 942 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 RRS1Q15050 365 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 NDUFA5Q16718 116 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CENPSQ8N2Z9 138 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 RMDN1Q96DB5 314 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 REXO4Q9GZR2 422 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 EPN3Q9H201 632 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CNGB3Q9NQW8 809 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 STOML2Q9UJZ1 356 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 TPRP12270 2363 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 SAC3D1A6NKF1 404 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 BTBD18B2RXH4 712 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 PJA2O43164 708 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 KPNA1P52294 538 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 THEMIS2Q5TEJ8 643 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 CCDC149Q6ZUS6 474 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 KLHL29Q96CT2 875 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 OLFM1Q99784 485 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 MRPL47Q9HD33 250 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 IFNKQ9P0W0 207 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 PALD1Q9ULE6 856 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 ERBINQ96RT1 1412 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 DDX39AO00148 427 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 OSBPP22059 807 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 RALGDSQ12967 914 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 MMRN1Q13201 1228 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 DNAJC3Q13217 504 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 PDAP1Q13442 181 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 LBRQ14739 615 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 EZH2Q15910 746 aaKnown RBP6.43□□□□□ -1.38
SCN1A-212ENST00000636194 TNIP3Q96KP6 325 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 SAR1BQ9Y6B6 198 aa6.43□□□□□ -1.38
SCN1A-212ENST00000636194 MYH15Q9Y2K3 1946 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms