RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 SRGAP2O75044 1071 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 LRG1P02750 347 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 CYP2E1P05181 493 aaPredicted RBP6.89□□□□□ -1.31
TCF4-277ENST00000635990 IRX4P78413 519 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 SARNPP82979 210 aaKnown RBP6.89□□□□□ -1.31
TCF4-277ENST00000635990 SNX1Q13596 522 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 MORC3Q14149 939 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 OSBP2Q969R2 916 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 HAUS1Q96CS2 278 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 ATP6V0A4Q9HBG4 840 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 PARVGQ9HBI0 331 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 AFF4Q9UHB7 1163 aaKnown RBP6.89□□□□□ -1.31
TCF4-277ENST00000635990 UTYO14607 1347 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 IQCB1Q15051 598 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 ZNF827Q17R98 1081 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 RCSD1Q6JBY9 416 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 EXOC4Q96A65 974 aa6.89□□□□□ -1.31
TCF4-277ENST00000635990 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
TCF4-277ENST00000635990 BAZ2BQ9UIF8 2168 aaKnown RBP6.89□□□□□ -1.31
TCF4-277ENST00000635990 CCDC160A6NGH7 325 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 KIF2AO00139 706 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 MED7O43513 233 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 DGKZQ13574 1117 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 KDELC2Q7Z4H8 507 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 FAM213AQ9BRX8 229 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 SLC16A4O15374 487 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ZMYND10O75800 440 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 GBP1P32455 592 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ALDH1A3P47895 512 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 NSUN2Q08J23 767 aaKnown RBP eCLIP6.88□□□□□ -1.31
TCF4-277ENST00000635990 SCRN1Q12765 414 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 MESDQ14696 234 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 DGKDQ16760 1214 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ARRDC4Q8NCT1 418 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 EXT2Q93063 718 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 NT5C1BQ96P26 610 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 TTC1Q99614 292 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 NR2F2P24468 414 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 HPDP32754 393 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 BAATQ14032 418 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 SMAD1Q15797 465 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 BTBD8Q5XKL5 378 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 TMCO5AQ8N6Q1 288 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 HASPINQ8TF76 798 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 RPGRIP1Q96KN7 1286 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 WDR46O15213 610 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 NSFP46459 744 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 ATXN3P54252 364 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 NR5A1Q13285 461 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 CYP26C1Q6V0L0 522 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 DYDC2Q96IM9 177 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 L3MBTL3Q96JM7 780 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 NAP1L3Q99457 506 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 POLR3FQ9H1D9 316 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 C1orf167Q5SNV9 1468 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ADGRB3O60242 1522 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 PDHXO00330 501 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 MED14O60244 1454 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ZC3H11AO75152 810 aaKnown RBP eCLIP6.88□□□□□ -1.31
TCF4-277ENST00000635990 PSMC2P35998 433 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 MFAP3P55082 362 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 NAA35Q5VZE5 725 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 ATRIPQ8WXE1 791 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 LARP4BQ92615 738 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 PLA2G4BP0C869 781 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 SLC10A5Q5PT55 438 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 CDC42EP5Q6NZY7 148 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 CNGA4Q8IV77 575 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 SLC16A10Q8TF71 515 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 IFT43Q96FT9 208 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 FAM161BQ96MY7 647 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 SRPK1Q96SB4 655 aaKnown RBP6.88□□□□□ -1.31
TCF4-277ENST00000635990 RBSNQ9H1K0 784 aa6.88□□□□□ -1.31
TCF4-277ENST00000635990 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 PTPN12Q05209 780 aaKnown RBP6.87□□□□□ -1.31
TCF4-277ENST00000635990 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 EXOC3L4Q17RC7 722 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 RNF149Q8NC42 400 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 SH3BP1Q9Y3L3 701 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 SSH2Q76I76 1423 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 ZBTB5O15062 677 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 GH1P01241 217 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 PCP11498 1178 aaKnown RBP6.87□□□□□ -1.31
TCF4-277ENST00000635990 ALDH3A1P30838 453 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 ST8SIA6P61647 398 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 ZNF699Q32M78 642 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 ARL13BQ3SXY8 428 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 GALNT17Q6IS24 598 aa6.87□□□□□ -1.31
TCF4-277ENST00000635990 LDHDQ86WU2 507 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms