RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ZSCAN5CA6NGD5 496 aaPredicted RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ANKRD65E5RJM6 399 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SLC26A4O43511 780 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 NOP2P46087 812 aaKnown RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 NNTQ13423 1086 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 ARSHQ5FYA8 562 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 DCAF17Q5H9S7 520 aaPredicted RBP11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 SFR1Q86XK3 245 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 GDF3Q9NR23 364 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 PCDHGC5Q9Y5F6 944 aa11.75□□□□□ -0.53
PSPC1-207ENST00000635251 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TOM1O60784 492 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 EEF2P13639 858 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 SLC9A1P19634 815 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 GUCY2FP51841 1108 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 CASP5P51878 434 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TNNC1P63316 161 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 IKQ13123 557 aaPredicted RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 GIT2Q14161 759 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 RPS6KA1Q15418 735 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 KNOP1Q1ED39 458 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TTC19Q6DKK2 380 aaPredicted RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 KLHL7Q8IXQ5 586 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 RABEP2Q9H5N1 569 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 MYH7BA7E2Y1 1941 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 LY75O60449 1722 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 MYH10P35580 1976 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 SHTN1A0MZ66 631 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 KCNK3O14649 394 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 EPB41P11171 864 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 CYP3A7P24462 503 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 CCT5P48643 541 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 SNAP25P60880 206 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 PSMC6P62333 389 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 PTK2Q05397 1052 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TCP10Q12799 353 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 NFIAQ12857 509 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 IFI16Q16666 785 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 EXOC3L4Q17RC7 722 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 USH1GQ495M9 461 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 C10orf76Q5T2E6 689 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 FRMD5Q7Z6J6 570 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 ZC3H3Q8IXZ2 948 aaKnown RBP11.74□□□□□ -0.53
PSPC1-207ENST00000635251 BCAS4Q8TDM0 211 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 DCAF4Q8WV16 495 aa11.74□□□□□ -0.53
PSPC1-207ENST00000635251 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 SPDYE3A6NKU9 549 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 UCHL3P15374 230 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 MAGEA9P43362 315 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 DDR1Q08345 913 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 FAM153CQ494X1 144 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 CERKLQ49MI3 558 aaPredicted RBP11.73□□□□□ -0.53
PSPC1-207ENST00000635251 KCTD16Q68DU8 428 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 REEP2Q9BRK0 252 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 FAM153AQ9UHL3 310 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 TRAF3IP3Q9Y228 551 aa11.73□□□□□ -0.53
PSPC1-207ENST00000635251 BZW2Q9Y6E2 419 aaKnown RBP11.73□□□□□ -0.53
PSPC1-207ENST00000635251 MEIS2O14770 477 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 EIF3HO15372 352 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 TBCAO75347 108 aaKnown RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 KRT14P02533 472 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 MYBP10242 640 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CACNB3P54284 484 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CORO7P57737 925 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 PTPROQ16827 1216 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 MOXD1Q6UVY6 613 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 ZNF571Q7Z3V5 609 aaPredicted RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 ZFPM1Q8IX07 1006 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 USP38Q8NB14 1042 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 ETNPPLQ8TBG4 499 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 MBOAT7Q96N66 472 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 INPP4AQ96PE3 977 aaPredicted RBP11.72□□□□□ -0.53
PSPC1-207ENST00000635251 AMNQ9BXJ7 453 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 PLCB1Q9NQ66 1216 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 TMCO5BA8MYB1 307 aa11.72□□□□□ -0.53
PSPC1-207ENST00000635251 POLRMTO00411 1230 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms