RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 TMEM2Q9UHN6 1383 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 TMEM191BP0C7N4 346 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 STX1BP61266 288 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 CCZ1BP86790 482 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL11A1-211ENST00000635193 CHMP6Q96FZ7 201 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 ZFP69BQ9UJL9 534 aa12.57□□□□□ -0.4
COL11A1-211ENST00000635193 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 A0A0G2JND7 137 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ECM2O94769 699 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 GLG1Q92896 1179 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 TRIM55Q9BYV6 548 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 CEP72Q9P209 647 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 SNX24Q9Y343 169 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 MEIS1O00470 390 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ALAS1P13196 640 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 KRT10P13645 584 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 NFRKBQ6P4R8 1299 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PPP4R3CPQ6ZMV5 832 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 NUDCD1Q96RS6 583 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PIH1D3Q9NQM4 214 aaKnown RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 NUB1Q9Y5A7 615 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ORC6Q9Y5N6 252 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 STXBP3O00186 592 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 MCF2P10911 925 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 VSNL1P62760 191 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 SLC17A8Q8NDX2 589 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PCIF1Q9H4Z3 704 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 MRPL47Q9HD33 250 aaKnown RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 DNAJC17Q9NVM6 304 aaKnown RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 CPP00450 1065 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PLS3P13797 630 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PRCPP42785 496 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ECE1P42892 770 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 GFPT1Q06210 699 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 USP6NLQ92738 828 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
COL11A1-211ENST00000635193 PSD3Q9NYI0 1048 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 HESX1Q9UBX0 185 aa12.56□□□□□ -0.4
COL11A1-211ENST00000635193 TOM1L1O75674 476 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 ART3Q13508 389 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 NUDCD3Q8IVD9 361 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 RHOT2Q8IXI1 618 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 ZNF804BA4D1E1 1349 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 ESYT3A0FGR9 886 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
COL11A1-211ENST00000635193 GNGT2O14610 69 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 CFLARO15519 480 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
COL11A1-211ENST00000635193 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 RSPH3Q86UC2 560 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 LRRC37BQ96QE4 947 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 DNAJC6O75061 913 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 NCF2P19878 526 aaPredicted RBP12.55□□□□□ -0.4
COL11A1-211ENST00000635193 KCNJ6P48051 423 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 CDR2Q01850 454 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 ATG16L1Q676U5 607 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 GFM2Q969S9 779 aaKnown RBP12.55□□□□□ -0.4
COL11A1-211ENST00000635193 COA7Q96BR5 231 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 A6NJR5 290 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 MCF2LO15068 1137 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 PPP1R37O75864 691 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 AP2B1P63010 937 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 GUCY1A3Q02108 690 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 MCF2L2Q86YR7 1114 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 HDAC11Q96DB2 347 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 FAM81BQ96LP2 452 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 NDE1Q9NXR1 346 aa12.55□□□□□ -0.4
COL11A1-211ENST00000635193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL11A1-211ENST00000635193 LRRIQ4A6NIV6 560 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 NCK2O43639 380 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 DIAPH2O60879 1101 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 DYNLT1P63172 113 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
COL11A1-211ENST00000635193 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
COL11A1-211ENST00000635193 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms