RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SMCR8Q8TEV9 937 aaPredicted RBP8.89□□□□□ -0.99
GPC3-204ENST00000631057 SCFD1Q8WVM8 642 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 CRYGNQ8WXF5 182 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 GJA10Q969M2 543 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 FAM20AQ96MK3 541 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 KCTD10Q9H3F6 313 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 TBC1D7Q9P0N9 293 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 VPS18Q9P253 973 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 DNM3Q9UQ16 869 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 CLEC11AQ9Y240 323 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 CAPN6Q9Y6Q1 641 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 COL2A1P02458 1487 aaPredicted RBP8.89□□□□□ -0.99
GPC3-204ENST00000631057 RGPD3A6NKT7 1758 aaPredicted RBP8.89□□□□□ -0.99
GPC3-204ENST00000631057 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
GPC3-204ENST00000631057 A0A0U1RQG5 324 aaPredicted RBP8.88□□□□□ -0.99
GPC3-204ENST00000631057 DDTLA6NHG4 134 aaPredicted RBP8.88□□□□□ -0.99
GPC3-204ENST00000631057 SPDYE3A6NKU9 549 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 LRRIQ3A6PVS8 624 aaPredicted RBP8.88□□□□□ -0.99
GPC3-204ENST00000631057 MEIS2O14770 477 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 IRF6O14896 467 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 ZNF185O15231 689 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 MED24O75448 989 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 NOL4O94818 638 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 RPA1P27694 616 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 SREBF1P36956 1147 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 STAT3P40763 770 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 PAFAH1B1P43034 410 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 LMAN1P49257 510 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 MMP14P50281 582 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 RBM5P52756 815 aaKnown RBP eCLIP8.88□□□□□ -0.99
GPC3-204ENST00000631057 POLR2FP61218 127 aaKnown RBP8.88□□□□□ -0.99
GPC3-204ENST00000631057 SPIRE1Q08AE8 756 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 C2orf54Q08AI8 447 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 TCP10Q12799 353 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 TRAF1Q13077 416 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 ASIC2Q16515 512 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 ABCB5Q2M3G0 1257 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 MUM1L1Q5H9M0 696 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 CCDC181Q5TID7 509 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 TATDN1Q6P1N9 297 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 CREG2Q8IUH2 290 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 NELFCDQ8IXH7 590 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 GOLGA6L1Q8N7Z2 621 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 COG1Q8WTW3 980 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 OSBPL9Q96SU4 736 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 CRACR2AQ9BSW2 395 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 DBNDD1Q9H9R9 158 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 NLRC4Q9NPP4 1024 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 RNF14Q9UBS8 474 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 FAM198AQ9UFP1 575 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 HPCAL4Q9UM19 191 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 SYNPO2Q9UMS6 1093 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 FAN1Q9Y2M0 1017 aa8.88□□□□□ -0.99
GPC3-204ENST00000631057 RBBP6Q7Z6E9 1792 aaKnown RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 ATRNL1Q5VV63 1379 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 NPHP3-ACAD11A0A0J9YXS1 232 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 F5H6K3 240 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 CIITAP33076 1130 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 GFPT1Q06210 699 aaPredicted RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 KLRC3Q07444 240 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 ADAM9Q13443 819 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 PRR16Q569H4 304 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 ARSHQ5FYA8 562 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 DACT2Q5SW24 774 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 POTEGQ6S5H5 508 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 POTEEQ6S8J3 1075 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 BTNL9Q6UXG8 535 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 CCNI2Q6ZMN8 369 aaPredicted RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 FRMD5Q7Z6J6 570 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 KIAA0825Q8IV33 1275 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 SYT2Q8N9I0 419 aaPredicted RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 FGFBP2Q9BYJ0 223 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 ZHX3Q9H4I2 956 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 AIPL1Q9NZN9 384 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 CWC15Q9P013 229 aaKnown RBP8.87□□□□□ -0.99
GPC3-204ENST00000631057 TRAF3IP3Q9Y228 551 aa8.87□□□□□ -0.99
GPC3-204ENST00000631057 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 PDXKO00764 312 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 CALUO43852 315 aaPredicted RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 ECE2O60344 883 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 TLR2O60603 784 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 N4BP1O75113 896 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 TBCAO75347 108 aaKnown RBP8.86□□□□□ -0.99
GPC3-204ENST00000631057 ENTPD3O75355 529 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 NDUFB10O96000 172 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 BMP3P12645 472 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 GAP43P17677 238 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ERCC3P19447 782 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 NR2F2P24468 414 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 ANXA13P27216 316 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 BAG6P46379 1132 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 CACNB3P54284 484 aa8.86□□□□□ -0.99
GPC3-204ENST00000631057 GYS2P54840 703 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms