RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	EPN3	Q9H201	632 aa		16.84	■□□□□ 0.29
BBS1-225	ENST00000630659	RANBP17	Q9H2T7	1088 aa	Known RBP	16.84	■□□□□ 0.29
BBS1-225	ENST00000630659	CUEDC2	Q9H467	287 aa		16.84	■□□□□ 0.29
BBS1-225	ENST00000630659	SAMSN1	Q9NSI8	373 aa	Known RBP	16.84	■□□□□ 0.29
BBS1-225	ENST00000630659	MYO1F	O00160	1098 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	GYPC	P04921	128 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	SCP2	P22307	547 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	NAP1L1	P55209	391 aa	Known RBP	16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	CUL4B	Q13620	913 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	PDIA5	Q14554	519 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	SNCB	Q16143	134 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	ANGEL2	Q5VTE6	544 aa	Known RBP	16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	KDM7A	Q6ZMT4	941 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	ZNF572	Q7Z3I7	529 aa	Predicted RBP	16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	MMGT1	Q8N4V1	131 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	RIN2	Q8WYP3	895 aa	Predicted RBP	16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	P3H4	Q92791	437 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	HOOK2	Q96ED9	719 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	RAB34	Q9BZG1	259 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	BLZF1	Q9H2G9	400 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	ATP6V0A4	Q9HBG4	840 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	LRWD1	Q9UFC0	647 aa		16.83	■□□□□ 0.28
BBS1-225	ENST00000630659	KRT83	P78385	493 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MOXD1	Q6UVY6	613 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	TRPM4	Q8TD43	1214 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MAGEF1	Q9HAY2	307 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	CYP3A7-CYP3A51P	A0A087WV96	503 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	OPLAH	O14841	1288 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MYL1	P05976	194 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	TAL1	P17542	331 aa	Predicted RBP	16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	PLCG1	P19174	1290 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	CYP3A7	P24462	503 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MAP2K1	Q02750	393 aa	Predicted RBP	16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	SKIDA1	Q1XH10	827 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	CCDC174	Q6PII3	467 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	CAVIN3	Q969G5	261 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	CALML4	Q96GE6	196 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MBOAT7	Q96N66	472 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	PLIN2	Q99541	437 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	P2RX7	Q99572	595 aa	Known RBP	16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	MMTAG2	Q9BU76	263 aa	Known RBP	16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	KIAA1683	Q9H0B3	1180 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	BATF3	Q9NR55	127 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	RMND1	Q9NWS8	449 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	KCNG1	Q9UIX4	513 aa		16.82	■□□□□ 0.28
BBS1-225	ENST00000630659	SPDYE3	A6NKU9	549 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	PIK3CD	O00329	1044 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	WDR46	O15213	610 aa	Known RBP	16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	TEX33	O43247	280 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	KRT86	O43790	486 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	MARCH6	O60337	910 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	ERVK-24	P63145	666 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	ARHGAP4	P98171	946 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	CAGE1	Q8TC20	777 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	CRYGN	Q8WXF5	182 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	LPAR1	Q92633	364 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	HAS1	Q92839	578 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	MMS19	Q96T76	1030 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	KBTBD4	Q9NVX7	518 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	ZNF112	Q9UJU3	913 aa		16.81	■□□□□ 0.28
BBS1-225	ENST00000630659	NDUFA10	O95299	355 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	RPN1	P04843	607 aa	Known RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	SARNP	P82979	210 aa	Known RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	TRMT44	Q8IYL2	757 aa	Known RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	FBXO28	Q9NVF7	368 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	MRPL11	Q9Y3B7	192 aa	Known RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	EPN1	Q9Y6I3	576 aa	Predicted RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659		A0A0U1RQJ8	604 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	LRRC10B	A6NIK2	292 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	SREBF1	P36956	1147 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	EPS15	P42566	896 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	HSP90AA4P	Q58FG1	418 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	NAA35	Q5VZE5	725 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	CCDC13	Q8IYE1	715 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	LRRC15	Q8TF66	581 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	CPLX3	Q8WVH0	158 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	ATRIP	Q8WXE1	791 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	JAKMIP2	Q96AA8	810 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	CD248	Q9HCU0	757 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	LIMA1	Q9UHB6	759 aa	Known RBP	16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	SAMM50	Q9Y512	469 aa		16.8	■□□□□ 0.28
BBS1-225	ENST00000630659	SBF1	O95248	1867 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	HOXA13	P31271	388 aa	Predicted RBP	16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	FXR1	P51114	621 aa	Known RBP eCLIP	16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	SLMAP	Q14BN4	828 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	SAMD1	Q6SPF0	538 aa	Predicted RBP	16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	ARMC9	Q7Z3E5	817 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	FAM212A	Q96EL1	285 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	GGA3	Q9NZ52	723 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	PPP2R3B	Q9Y5P8	575 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	ABCB11	O95342	1321 aa		16.79	■□□□□ 0.28
BBS1-225	ENST00000630659	KLHL33	A6NCF5	533 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	PPP1R3G	B7ZBB8	358 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	NEBL	O76041	1014 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	CD44	P16070	742 aa	Known RBP	16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	LSP1	P33241	339 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	HIRA	P54198	1017 aa	Predicted RBP	16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	SEMA3F	Q13275	785 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	GRB10	Q13322	594 aa		16.78	■□□□□ 0.28
BBS1-225	ENST00000630659	TSR1	Q2NL82	804 aa	Known RBP	16.78	■□□□□ 0.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms