RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
SPTAN1-219ENST00000629378 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
SPTAN1-219ENST00000629378 XIRP2A4UGR9 3374 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 PRRC2BQ5JSZ5 2229 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 CUL9Q8IWT3 2517 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 ABHD14A-ACY1A0A1B0GW23 586 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 VPS37CA5D8V6 355 aaPredicted RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 LGR5O75473 907 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 STAM2O75886 525 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 BAG4O95429 457 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 CTSHP09668 335 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 HOXC8P31273 242 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 ADD1P35611 737 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 GRB10Q13322 594 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 IKBKEQ14164 716 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 CPLX2Q6PUV4 134 aaKnown RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 CYP2W1Q8TAV3 490 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 ZBTB10Q96DT7 871 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 THEGQ9P2T0 379 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 KIF3AQ9Y496 699 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 V9GY48 417 aaPredicted RBP10.33□□□□□ -0.76
SPTAN1-219ENST00000629378 COL4A4P53420 1690 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 LPXNO60711 386 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 CDKL5O76039 1030 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 GJB5O95377 273 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 KCNA2P16389 499 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 MARK3P27448 753 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 CDC27P30260 824 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 TCF7P36402 384 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 RCAN1P53805 252 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 ADAM17P78536 824 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 MRPS5P82675 430 aaKnown RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 ARHGAP4P98171 946 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 FUT2Q10981 343 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 SKIV2LQ15477 1246 aaKnown RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 RTN1Q16799 776 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 RUFY4Q6ZNE9 571 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 LMBR1Q8WVP7 490 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 ATXN2LQ8WWM7 1075 aaKnown RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 NECAB3Q96P71 396 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 UIMC1Q96RL1 719 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 SENP7Q9BQF6 1050 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 FAM217BQ9NTX9 383 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 TMEM260Q9NX78 707 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 ORC3Q9UBD5 711 aaPredicted RBP10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 SIP14410 1827 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 CNTNAP5Q8WYK1 1306 aa10.32□□□□□ -0.76
SPTAN1-219ENST00000629378 LOXHD1Q8IVV2 1947 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 CCDC196A0A1B0GTZ2 297 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 LINC01553A4QN01 128 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 H3BQV1 296 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 UPP2O95045 317 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 PARNO95453 639 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 F13A1P00488 732 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 CHRNA1P02708 482 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 ARP10275 920 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 POU3F3P20264 500 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 KCNQ1P51787 676 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 XRRA1Q6P2D8 792 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 MYOCDQ8IZQ8 938 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 GDPD5Q8WTR4 605 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 GPRASP2Q96D09 838 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 RAD9AQ99638 391 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 SUGCTQ9HAC7 445 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
SPTAN1-219ENST00000629378 NID2Q14112 1375 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 SPDYE3A6NKU9 549 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 GOLGA6L22H0YM25 854 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 STXBP3O00186 592 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 BMP1P13497 986 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 FOSBP53539 338 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 NAPAP54920 295 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 IGBP1P78318 339 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 MTMR1Q13613 665 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 NTRK3Q16288 839 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 MARCH8Q5T0T0 291 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 SEPT1Q8WYJ6 367 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 PCYT2Q99447 389 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 C17orf80Q9BSJ5 609 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 RIC8AQ9NPQ8 531 aa10.3□□□□□ -0.76
SPTAN1-219ENST00000629378 ZNF215Q9UL58 517 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms