RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 APBA2Q99767 749 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 GTPBP4Q9BZE4 634 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 FOCADQ5VW36 1801 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 JAK3P52333 1124 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 PRKCZQ05513 592 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 CCDC150Q8NCX0 1101 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 TMEM60Q9H2L4 133 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZNF18P17022 549 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 FAM102BQ5T8I3 360 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 PPFIBP1Q86W92 1011 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 PIGOQ8TEQ8 1089 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 HHIPL1Q96JK4 782 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 MAN1B1Q9UKM7 699 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SBF1O95248 1867 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SLC37A4O43826 429 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 FANCCQ00597 558 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 PCNX4Q63HM2 1172 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 TMEM139Q8IV31 216 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SERTAD1Q9UHV2 236 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 PCDHA10Q9Y5I2 948 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 M0QZ92 97 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 TNNT1P13805 278 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 KCNJ6P48051 423 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ACVR2BQ13705 512 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 MORC3Q14149 939 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SH3RF1Q7Z6J0 888 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 IL31RAQ8NI17 732 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 GPRASP2Q96D09 838 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 AK8Q96MA6 479 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 TBC1D7Q9P0N9 293 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 FANCGO15287 622 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ADCYAP1R1P41586 468 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZNF592Q92610 1267 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZCCHC17Q9NP64 241 aaKnown RBP13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZNF302Q9NR11 478 aa13.81□□□□□ -0.2
SYNGAP1-207ENST00000628646 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 MAFGO15525 162 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 TBC1D8BQ0IIM8 1120 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 HERC4Q5GLZ8 1057 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 SEPT1Q8WYJ6 367 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 SH2D3AQ9BRG2 576 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 FAM49AQ9H0Q0 323 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 BLZF1Q9H2G9 400 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 SCN4AP35499 1836 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 MSH4O15457 936 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 STAM2O75886 525 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 KIF20AO95235 890 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 IPO7O95373 1038 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 TMOD1P28289 359 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 APTXQ7Z2E3 356 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 MYCT1Q8N699 235 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 NACC1Q96RE7 527 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 PPP1R16BQ96T49 567 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 MYH8P13535 1937 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 KBTBD13C9JR72 458 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
SYNGAP1-207ENST00000628646 SFNP31947 248 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 STAT5BP51692 787 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 MYL5Q02045 173 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 TBX2Q13207 712 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 ZNF536O15090 1300 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 HARSP12081 509 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 GRK4P32298 578 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 TM4SF4P48230 202 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 SMTNP53814 917 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 VSIG10LQ86VR7 867 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 FANCLQ9NW38 375 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 FAM86B1E9PN63 330 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 FAM86B2P0C5J1 330 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 QARSP47897 775 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 GJC2Q5T442 439 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
SYNGAP1-207ENST00000628646 NOVP48745 357 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms