RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CST5P28325 142 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 KRT2P35908 639 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 SREBF1P36956 1147 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 SKOR1P84550 965 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 ARHGAP4P98171 946 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 NEDD9Q14511 834 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 GALNT17Q6IS24 598 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 CXCL17Q6UXB2 119 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 VSIG10LQ86VR7 867 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 FAM177A1Q8N128 213 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 GIMAP8Q8ND71 665 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 NSUN7Q8NE18 718 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 AFG1LQ8WV93 481 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 COPS5Q92905 334 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 SPATA33Q96N06 139 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 SDF4Q9BRK5 362 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 LLPHQ9BRT6 129 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 TSEN34Q9BSV6 310 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 PRDM5Q9NQX1 630 aaPredicted RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 KCNJ14Q9UNX9 436 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 PHF24Q9UPV7 400 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 FRMPD4Q14CM0 1322 aa8.22□□□□□ -1.09
NPLOC4-221ENST00000625705 A0A0U1RQG5 324 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 RBM47A0AV96 593 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 J3QL48 77 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 TLR3O15455 904 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 MARCH6O60337 910 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 PQBP1O60828 265 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 CABYRO75952 493 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 ARIH2O95376 493 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 CTDNEP1O95476 244 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 UBA1P22314 1058 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 RTP1P59025 263 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 MRPS9P82933 396 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 SETQ01105 290 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 GUCY1B3Q02153 619 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 NONOQ15233 471 aaKnown RBP eCLIP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 DGKDQ16760 1214 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 TMEM63BQ5T3F8 832 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 PTCRAQ6ISU1 281 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 PLA2G4DQ86XP0 818 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 GPRASP2Q96D09 838 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 C8orf76Q96K31 380 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 INPP4AQ96PE3 977 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 MXRA8Q9BRK3 442 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 MTG1Q9BT17 334 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 DDX41Q9UJV9 622 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 MROH7Q68CQ1 1323 aa8.21□□□□□ -1.1
NPLOC4-221ENST00000625705 DCDC2CA8MYV0 355 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 SPATA31C2B4DYI2 1134 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 H3BQV1 296 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 DDX39AO00148 427 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 MMP3P08254 477 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 ZNF286BP0CG31 522 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 COL6A1P12109 1028 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CLK2P49760 499 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 ARHGAP1Q07960 439 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 LRRC26Q2I0M4 334 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 TRIM60Q495X7 471 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 PRR16Q569H4 304 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CELF3Q5SZQ8 465 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CCDC62Q6P9F0 684 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 SLC39A5Q6ZMH5 540 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 CYFIP1Q7L576 1253 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 UBE2Q1Q7Z7E8 422 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 HSCBQ8IWL3 235 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 DAGLBQ8NCG7 672 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 KLHDC9Q8NEP7 349 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 PPTC7Q8NI37 304 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 TBCKQ8TEA7 893 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 TMX3Q96JJ7 454 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 LBHD1Q9BQE6 289 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 PHF20Q9BVI0 1012 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 KATNAL1Q9BW62 490 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 GJB4Q9NTQ9 266 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 ZNF215Q9UL58 517 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 SMC3Q9UQE7 1217 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 UBIAD1Q9Y5Z9 338 aa8.2□□□□□ -1.1
NPLOC4-221ENST00000625705 MYH7BA7E2Y1 1941 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 MAFGO15525 162 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 MMP1P03956 469 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 SYN1P17600 705 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 ITGB5P18084 799 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 ICAM3P32942 547 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 PSMC6P62333 389 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 ITGA7Q13683 1181 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 INF2Q27J81 1249 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 LETM2Q2VYF4 491 aa8.19□□□□□ -1.1
NPLOC4-221ENST00000625705 UTP14CQ5TAP6 766 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms