RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 SNAP25P60880 206 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 KRT17Q04695 432 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 ZNF543Q08ER8 600 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 LRMPQ12912 555 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 EPHA7Q15375 998 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 PGBD1Q96JS3 809 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 TTC1Q99614 292 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 GABBR1Q9UBS5 961 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 HSF2BPO75031 334 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 GGPS1O95749 300 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 GBP1P32455 592 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 PPATQ06203 517 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 ZNF568Q3ZCX4 644 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 EFCAB13Q8IY85 973 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 BANK1Q8NDB2 785 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 OPTNQ96CV9 577 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 RFC5P40937 340 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 BACE1P56817 501 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 XKR3Q5GH77 459 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 NNMTP40261 264 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 LGSNQ5TDP6 509 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 SWSAP1Q6NVH7 229 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 ENAHQ8N8S7 591 aaPredicted RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
CHD2-205ENST00000625662 RDM1Q8NG50 284 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
CHD2-205ENST00000625662 FKTNO75072 461 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 IL1R1P14778 569 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.36
CHD2-205ENST00000625662 CC2D1AQ6P1N0 951 aaPredicted RBP12.77□□□□□ -0.36
CHD2-205ENST00000625662 SCYL2Q6P3W7 929 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 PPP1R9BQ96SB3 815 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 DDX50Q9BQ39 737 aaKnown RBP12.77□□□□□ -0.36
CHD2-205ENST00000625662 POLLQ9UGP5 575 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 NR2F2P24468 414 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 BAG1Q99933 345 aaPredicted RBP12.77□□□□□ -0.36
CHD2-205ENST00000625662 MXD3Q9BW11 206 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 GUCA1BQ9UMX6 200 aa12.77□□□□□ -0.36
CHD2-205ENST00000625662 EIF3CLB5ME19 914 aaKnown RBP12.77□□□□□ -0.37
CHD2-205ENST00000625662 MAGEA1P43355 309 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 RECQLP46063 649 aaPredicted RBP12.77□□□□□ -0.37
CHD2-205ENST00000625662 MORC3Q14149 939 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 EXOC3L4Q17RC7 722 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 EIF3CQ99613 913 aaKnown RBP12.77□□□□□ -0.37
CHD2-205ENST00000625662 TAB2Q9NYJ8 693 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 E2F5Q15329 346 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 PPP2R5EQ16537 467 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 CEP55Q53EZ4 464 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
CHD2-205ENST00000625662 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 SH3BP5O60239 455 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 CRCPO75575 148 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 PPM1EQ8WY54 764 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 THAP12O43422 761 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 NR3C2P08235 984 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 CROCCP2Q86T23 111 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 RHPN2Q8IUC4 686 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 ERAP1Q9NZ08 941 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 FAM205AQ6ZU69 1335 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 HBP1O60381 514 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 HEXIM1O94992 359 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 AFPP02771 609 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 KARSQ15046 597 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 GLB1LQ6UWU2 654 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■■□□□ 14.1
CHD2-205ENST00000625662 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 GAS2O43903 313 aaKnown RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 IVLP07476 585 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 ATP5DP30049 168 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
CHD2-205ENST00000625662 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 CCDC89Q8N998 374 aa12.76□□□□□ -0.37
CHD2-205ENST00000625662 GANCQ8TET4 914 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms