RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 IGKV6D-21A0A0A0MT36 114 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 MYMKA6NI61 221 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 SMTNL1A8MU46 457 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 IGHA2P01877 340 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 QARSP47897 775 aaKnown RBP13.13□□□□□ -0.31
LINC00963-220ENST00000625171 PSMC5P62195 406 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 MCM6Q14566 821 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 DPCR1Q3MIW9 517 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 ABHD15Q6UXT9 468 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-220ENST00000625171 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
LINC00963-220ENST00000625171 HTTP42858 3142 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
LINC00963-220ENST00000625171 E9PMD0 336 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 COBLO75128 1261 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 CCNE2O96020 404 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 PGK2P07205 417 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 CYP11B2P19099 503 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 C11orf57Q6ZUT1 292 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-220ENST00000625171 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
LINC00963-220ENST00000625171 DDX12PQ92771 950 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 TIPINQ9BVW5 301 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
LINC00963-220ENST00000625171 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
LINC00963-220ENST00000625171 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 PPP1R3GB7ZBB8 358 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 PSAPP07602 524 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 GUCY2CP25092 1073 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 SP2Q02086 613 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 METTL7BQ6UX53 244 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 MAML3Q96JK9 1138 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 PLIN2Q99541 437 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 LXNQ9BS40 222 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 BLZF1Q9H2G9 400 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 GJD2Q9UKL4 321 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
LINC00963-220ENST00000625171 MAFBQ9Y5Q3 323 aaPredicted RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 ZNFX1Q9P2E3 1918 aaKnown RBP13.11□□□□□ -0.31
LINC00963-220ENST00000625171 BIN1O00499 593 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-220ENST00000625171 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
LINC00963-220ENST00000625171 PSMC6P62333 389 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
LINC00963-220ENST00000625171 NCAPHQ15003 741 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 OLFML2BQ68BL8 750 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 RINT1Q6NUQ1 792 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 MIS18BP1Q6P0N0 1132 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 DPP9Q86TI2 863 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 AFAP1L1Q8TED9 768 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 SOCS4Q8WXH5 440 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 STAMQ92783 540 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
LINC00963-220ENST00000625171 ABHD16BQ9H3Z7 469 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 SEL1LQ9UBV2 794 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
LINC00963-220ENST00000625171 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.313e-7■■■□□ 16.5
LINC00963-220ENST00000625171 STBD1O95210 358 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
LINC00963-220ENST00000625171 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
LINC00963-220ENST00000625171 CASP1P29466 404 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 SLC26A2P50443 739 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 ZNF131P52739 623 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 ACTR2P61160 394 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 MYL5Q02045 173 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 CYP4A11Q02928 519 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 CRHR2Q13324 411 aa13.09□□□□□ -0.31
LINC00963-220ENST00000625171 GIT2Q14161 759 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms