RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 ALS2CLQ60I27 953 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 C16orf86Q6ZW13 317 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 BZW1Q7L1Q6 419 aaKnown RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PPP4R1Q8TF05 950 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 KCNB2Q92953 911 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 CEP95Q96GE4 821 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PHF20Q9BVI0 1012 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 SPTLC3Q9NUV7 552 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PYCARDQ9ULZ3 195 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 GINS2Q9Y248 185 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PPM1FP49593 454 aaPredicted RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 EIF3BP55884 814 aaKnown RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 IRX4P78413 519 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 C17orf53Q8N3J3 647 aaPredicted RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 RSRC1Q96IZ7 334 aaKnown RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 EPSTI1Q96J88 318 aa9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 PPANQ9NQ55 473 aaKnown RBP9.62□□□□□ -0.87
AP000542.3-201ENST00000623391 CYP2D6P10635 497 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 TBXAS1P24557 533 aaPredicted RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 KCNJ6P48051 423 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CDC42EP1Q00587 391 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ASPHQ12797 758 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 TBC1D16Q8TBP0 767 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CNOT10Q9H9A5 744 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 GRID2IPA4D2P6 1211 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 FAM83BQ5T0W9 1011 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ECEL1O95672 775 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 RPS12P25398 132 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 XRRA1Q6P2D8 792 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ADGRF4Q8IZF3 695 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 PRPF38AQ8NAV1 312 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 PFDN4Q9NQP4 134 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ZSCAN20P17040 1043 aaPredicted RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 STX2P32856 288 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ARHGAP4P98171 946 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 PDIA6Q15084 440 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 EPHA7Q15375 998 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ARMCX2Q7L311 632 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 DAGLBQ8NCG7 672 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 CCSER1Q9C0I3 900 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 SAMSN1Q9NSI8 373 aaKnown RBP9.61□□□□□ -0.87
AP000542.3-201ENST00000623391 C21orf2O43822 256 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 CDC27P30260 824 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 PHKA2P46019 1235 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 COASYQ13057 564 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 DNAJC24Q6P3W2 148 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 SLC10A4Q96EP9 437 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 PGBD1Q96JS3 809 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 DONSONQ9NYP3 566 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 SLC12A6Q9UHW9 1150 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 ANKRD26Q9UPS8 1709 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 C19orf81C9J6K1 198 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 WDR46O15213 610 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 FASTKD5Q7L8L6 764 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 RFX6Q8HWS3 928 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 VCXQ9H320 206 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 UBE2TQ9NPD8 197 aaPredicted RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 C3P01024 1663 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 EIF4A3P38919 411 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 PSMC5P62195 406 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 FAM47CQ5HY64 1035 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 CEP85LQ5SZL2 805 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 TRIM72Q6ZMU5 477 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 FRMD5Q7Z6J6 570 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 RNF10Q8N5U6 811 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 CABS1Q96KC9 395 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 MSTO1Q9BUK6 570 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 GOLPH3LQ9H4A5 285 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 ACAD9Q9H845 621 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L15C9J2P7 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L13C9JLJ4 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L11C9JVI0 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L18D6R9N7 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L22D6RA61 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L17D6RBQ6 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L19D6RCP7 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L20D6RJB6 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 NOL3O60936 208 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 GFPT2O94808 682 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 OATP04181 439 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 KPNA2P52292 529 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 CAV1Q03135 178 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 USP17L24Q0WX57 530 aa9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 KNOP1Q1ED39 458 aaKnown RBP9.6□□□□□ -0.87
AP000542.3-201ENST00000623391 C2orf69Q8N8R5 385 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms