RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
CD99-211ENST00000623253 COL4A6Q14031 1691 aa18.59■□□□□ 0.57
CD99-211ENST00000623253 CCDC69A6NI79 296 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 SPDYE3A6NKU9 549 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 PRC1O43663 620 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 RXRAP19793 462 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 SMARCA1P28370 1054 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 GNAQP50148 359 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 DLX2Q07687 328 aaPredicted RBP18.58■□□□□ 0.56
CD99-211ENST00000623253 MTMR1Q13613 665 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 UBE2SQ16763 222 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 MARCH8Q5T0T0 291 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 TSHZ1Q6ZSZ6 1077 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 CCDC82Q8N4S0 544 aa18.58■□□□□ 0.56
CD99-211ENST00000623253 SRBD1Q8N5C6 995 aaKnown RBP18.58■□□□□ 0.56
CD99-211ENST00000623253 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
CD99-211ENST00000623253 NLRC5Q86WI3 1866 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 hCG_1642624A0A1W2PR95 340 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 POTEB3A0JP26 581 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 SGSM2O43147 1006 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 DGKIO75912 1065 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 LINC00271P0C7V0 271 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 CD52P31358 61 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 GTF2F1P35269 517 aaKnown RBP eCLIP18.57■□□□□ 0.568e-7■■■■□ 21.8
CD99-211ENST00000623253 IRS1P35568 1242 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 MRPS6P82932 125 aaKnown RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 TMEM62Q0P6H9 643 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 CTC1Q2NKJ3 1217 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 POTEBQ6S5H4 581 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
CD99-211ENST00000623253 CLP1Q92989 425 aaKnown RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 AGO3Q9H9G7 860 aaKnown RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 RC3H2Q9HBD1 1191 aaKnown RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 RBM8AQ9Y5S9 174 aaKnown RBP18.57■□□□□ 0.56
CD99-211ENST00000623253 MBLAC1A4D2B0 266 aaPredicted RBP18.56■□□□□ 0.56
CD99-211ENST00000623253 C19orf67A6NJJ6 358 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 M0QZ92 97 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 LINC01565O15544 149 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 INSRRP14616 1297 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 IBSPP21815 317 aaPredicted RBP18.56■□□□□ 0.56
CD99-211ENST00000623253 SMAD2Q15796 467 aaKnown RBP18.56■□□□□ 0.56
CD99-211ENST00000623253 IER5Q5VY09 327 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 ZNF689Q96CS4 500 aaPredicted RBP18.56■□□□□ 0.56
CD99-211ENST00000623253 AZI2Q9H6S1 392 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 PCDHA6Q9UN73 950 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 TRPC6Q9Y210 931 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 PCDHA8Q9Y5H6 950 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 UBIAD1Q9Y5Z9 338 aa18.56■□□□□ 0.56
CD99-211ENST00000623253 MRPL42Q9Y6G3 142 aaKnown RBP18.56■□□□□ 0.56
CD99-211ENST00000623253 RALGAPA2Q2PPJ7 1873 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 RRN3P2A6NIE6 340 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 MBTPS2O43462 519 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 MMP1P03956 469 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 MCM5P33992 734 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 NDUFV1P49821 464 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 PAN2Q504Q3 1202 aaKnown RBP18.55■□□□□ 0.56
CD99-211ENST00000623253 HEATR3Q7Z4Q2 680 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 TMTC2Q8N394 836 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 POP1Q99575 1024 aaKnown RBP18.55■□□□□ 0.56
CD99-211ENST00000623253 PLVAPQ9BX97 442 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 JPH1Q9HDC5 661 aaPredicted RBP18.55■□□□□ 0.56
CD99-211ENST00000623253 JADE2Q9NQC1 790 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 PLAGL2Q9UPG8 496 aa18.55■□□□□ 0.56
CD99-211ENST00000623253 STXBP3O00186 592 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 SH2B2O14492 632 aaPredicted RBP18.54■□□□□ 0.56
CD99-211ENST00000623253 TBX10O75333 385 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 SMAD4Q13485 552 aaKnown RBP18.54■□□□□ 0.56
CD99-211ENST00000623253 RTN4RL1Q86UN2 441 aaPredicted RBP18.54■□□□□ 0.56
CD99-211ENST00000623253 TRAPPC12Q8WVT3 735 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 LINC01599Q8WXQ3 324 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
CD99-211ENST00000623253 PPP2R3CQ969Q6 453 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 FTHL17Q9BXU8 183 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 SLC9A2Q9UBY0 812 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 MUTYHQ9UIF7 546 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 CD207Q9UJ71 328 aa18.54■□□□□ 0.56
CD99-211ENST00000623253 MAFGO15525 162 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 RPLP2P05387 115 aaKnown RBP18.53■□□□□ 0.56
CD99-211ENST00000623253 CALM1P0DP23 149 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 CALM2P0DP24 149 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 CALM3P0DP25 149 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 PAK2Q13177 524 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 ADAM15Q13444 863 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 CAMK1Q14012 370 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 CMTR2Q8IYT2 770 aaKnown RBP18.53■□□□□ 0.56
CD99-211ENST00000623253 TMEM87BQ96K49 555 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 PCYT2Q99447 389 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 LRFN2Q9ULH4 789 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 PADI3Q9ULW8 664 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 TRPV2Q9Y5S1 764 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
CD99-211ENST00000623253 KAT6AQ92794 2004 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 PPFIA3O75145 1194 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 ITGB1P05556 798 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 STAG3L1P0CL83 205 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 DNAJB1P25685 340 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 HFE2Q6ZVN8 426 aa18.52■□□□□ 0.56
CD99-211ENST00000623253 RBM23Q86U06 439 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms