RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 HCN4Q9Y3Q4 1203 aa27.26■■□□□ 1.95
CPSF1-214ENST00000622776 TTC3P53804 2025 aa27.26■■□□□ 1.95
CPSF1-214ENST00000622776 PIEZO1Q92508 2521 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 FAM86C2PA6NEL3 165 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 RB1P06400 928 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 COL19A1Q14993 1142 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 FBXO47Q5MNV8 452 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 CREB3L3Q68CJ9 461 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 LRRC2Q9BYS8 371 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 ARIH1Q9Y4X5 557 aaPredicted RBP27.25■■□□□ 1.95
CPSF1-214ENST00000622776 CDY2AQ9Y6F7 541 aa27.25■■□□□ 1.95
CPSF1-214ENST00000622776 RALGAPA2Q2PPJ7 1873 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 C5orf67F2Z3F1 127 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 LINC00271P0C7V0 271 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 SSTR3P32745 418 aaPredicted RBP27.24■■□□□ 1.95
CPSF1-214ENST00000622776 BMPR1AP36894 532 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 IGBP1P78318 339 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 EP400NLQ6ZTU2 488 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 HEATR3Q7Z4Q2 680 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 PCYT2Q99447 389 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 ESYT1Q9BSJ8 1104 aa27.24■■□□□ 1.95
CPSF1-214ENST00000622776 RC3H2Q9HBD1 1191 aaKnown RBP27.24■■□□□ 1.95
CPSF1-214ENST00000622776 ADGRA3Q8IWK6 1321 aa27.23■■□□□ 1.95
CPSF1-214ENST00000622776 RRN3P2A6NIE6 340 aa27.23■■□□□ 1.95
CPSF1-214ENST00000622776 NECTIN1Q15223 517 aa27.23■■□□□ 1.95
CPSF1-214ENST00000622776 TSHZ1Q6ZSZ6 1077 aa27.23■■□□□ 1.95
CPSF1-214ENST00000622776 C11orf84Q9BUA3 381 aaPredicted RBP27.23■■□□□ 1.95
CPSF1-214ENST00000622776 JPH1Q9HDC5 661 aaPredicted RBP27.23■■□□□ 1.95
CPSF1-214ENST00000622776 RWDD3Q9Y3V2 267 aa27.23■■□□□ 1.95
CPSF1-214ENST00000622776 INSRRP14616 1297 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 MRPS6P82932 125 aaKnown RBP27.22■■□□□ 1.95
CPSF1-214ENST00000622776 SGMS1Q86VZ5 419 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 MICU3Q86XE3 530 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 CLP1Q92989 425 aaKnown RBP27.22■■□□□ 1.95
CPSF1-214ENST00000622776 ZBTB10Q96DT7 871 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 LMAN2LQ9H0V9 348 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 AGO3Q9H9G7 860 aaKnown RBP27.22■■□□□ 1.95
CPSF1-214ENST00000622776 KCNH7Q9NS40 1196 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 SLC9A2Q9UBY0 812 aa27.22■■□□□ 1.95
CPSF1-214ENST00000622776 GRM6O15303 877 aa27.21■■□□□ 1.95
CPSF1-214ENST00000622776 RPLP2P05387 115 aaKnown RBP27.21■■□□□ 1.95
CPSF1-214ENST00000622776 ZNF689Q96CS4 500 aaPredicted RBP27.21■■□□□ 1.95
CPSF1-214ENST00000622776 MXRA8Q9BRK3 442 aa27.21■■□□□ 1.95
CPSF1-214ENST00000622776 FAM49AQ9H0Q0 323 aaPredicted RBP27.21■■□□□ 1.95
CPSF1-214ENST00000622776 AZI2Q9H6S1 392 aa27.21■■□□□ 1.95
CPSF1-214ENST00000622776 CLDND1Q9NY35 253 aa27.21■■□□□ 1.95
CPSF1-214ENST00000622776 NCK2O43639 380 aa27.2■■□□□ 1.94
CPSF1-214ENST00000622776 CD52P31358 61 aa27.2■■□□□ 1.94
CPSF1-214ENST00000622776 BTG3Q14201 252 aaPredicted RBP27.2■■□□□ 1.94
CPSF1-214ENST00000622776 IER5Q5VY09 327 aa27.2■■□□□ 1.94
CPSF1-214ENST00000622776 FAM50BQ9Y247 325 aa27.2■■□□□ 1.94
CPSF1-214ENST00000622776 WWC2Q6AWC2 1192 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 SYNE3Q6ZMZ3 975 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 CYP2W1Q8TAV3 490 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 LINC01599Q8WXQ3 324 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 TNPO1Q92973 898 aaKnown RBP27.19■■□□□ 1.94
CPSF1-214ENST00000622776 ANO2Q9NQ90 1003 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 TRPC6Q9Y210 931 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 SQORQ9Y6N5 450 aa27.19■■□□□ 1.94
CPSF1-214ENST00000622776 DGKIO75912 1065 aa27.18■■□□□ 1.94
CPSF1-214ENST00000622776 RTN4RL1Q86UN2 441 aaPredicted RBP27.18■■□□□ 1.94
CPSF1-214ENST00000622776 SDF4Q9BRK5 362 aa27.18■■□□□ 1.94
CPSF1-214ENST00000622776 NFASCO94856 1347 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 CNTNAP5Q8WYK1 1306 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 ALADP13716 330 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 LTBRP36941 435 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 NAPAP54920 295 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 ACTR2P61160 394 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 PLCB4Q15147 1175 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 CTC1Q2NKJ3 1217 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 TYW1BQ6NUM6 668 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 APOA5Q6Q788 366 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 PLPPR4Q7Z2D5 763 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 PGBD1Q96JS3 809 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 FTHL17Q9BXU8 183 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 RIC8AQ9NPQ8 531 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 PCDHA2Q9Y5H9 948 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 TRPV2Q9Y5S1 764 aa27.17■■□□□ 1.94
CPSF1-214ENST00000622776 POTEB3A0JP26 581 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 M0QZ92 97 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 FOSP01100 380 aaPredicted RBP27.16■■□□□ 1.94
CPSF1-214ENST00000622776 ARP10275 920 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 STAT5BP51692 787 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 TMEM62Q0P6H9 643 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 HYAL1Q12794 435 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 POTEBQ6S5H4 581 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 TEX2Q8IWB9 1127 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 TRAPPC12Q8WVT3 735 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 PLVAPQ9BX97 442 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 RBM28Q9NW13 759 aaKnown RBP27.16■■□□□ 1.94
CPSF1-214ENST00000622776 PRKAG3Q9UGI9 489 aa27.16■■□□□ 1.94
CPSF1-214ENST00000622776 PRR33A8MZF0 331 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 ZP2Q05996 745 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 CEP55Q53EZ4 464 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 PPP1R18Q6NYC8 613 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 CRIPAKQ8N1N5 446 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 PADI3Q9ULW8 664 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 ATG2AQ2TAZ0 1938 aa27.15■■□□□ 1.94
CPSF1-214ENST00000622776 MMP1P03956 469 aa27.14■■□□□ 1.94
CPSF1-214ENST00000622776 HOXD11P31277 338 aaPredicted RBP27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms