RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SLC35B4Q969S0 331 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 EAF2Q96CJ1 260 aaPredicted RBP8.6□□□□□ -1.03
VPS11-209ENST00000622309 CCDC42Q96M95 316 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 ZNF317Q96PQ6 595 aaPredicted RBP8.6□□□□□ -1.03
VPS11-209ENST00000622309 ALG1Q9BT22 464 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 BRD8Q9H0E9 1235 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 RNF14Q9UBS8 474 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 LRCH1Q9Y2L9 728 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 SH3GLB1Q9Y371 365 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 CAPN6Q9Y6Q1 641 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 KIF1AQ12756 1690 aa8.6□□□□□ -1.03
VPS11-209ENST00000622309 CRYBG1Q9Y4K1 1723 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 MAGEA13PA6NCF6 341 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 KCNJ18B7U540 433 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 H0Y3Z8 333 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 NVLO15381 856 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 CD44P16070 742 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 DNA2P51530 1060 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 TNNC1P63316 161 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 KCNJ12Q14500 433 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 TOMM20Q15388 145 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 SLC44A4Q53GD3 710 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 FOXB2Q5VYV0 432 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS11-209ENST00000622309 PIGOQ8TEQ8 1089 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 WDR60Q8WVS4 1066 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 EDC3Q96F86 508 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 MS4A14Q96JA4 679 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 MPHOSPH6Q99547 160 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 DNAJC7Q99615 494 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 AGXT2Q9BYV1 514 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 MIS12Q9H081 205 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 MLXIPQ9HAP2 919 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 INTS9Q9NV88 658 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 UTP6Q9NYH9 597 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 KLF18A0A0U1RQI7 1052 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 NCK2O43639 380 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 PDE6CP51160 858 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 ADCY1Q08828 1119 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 BNIP1Q12981 228 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 C4orf46Q504U0 113 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 SNRNP27Q8WVK2 155 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 SREK1Q8WXA9 508 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 PBKQ96KB5 322 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 IFIH1Q9BYX4 1025 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 CYP39A1Q9NYL5 469 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 LARSQ9P2J5 1176 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 ABCC12Q96J65 1359 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 F8VZ95 297 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 H0YGN5 161 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 TPBGLP0DKB5 382 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 FUT4P22083 530 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 PTDSS1P48651 473 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 WDR59Q6PJI9 974 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 ZC3H18Q86VM9 953 aaKnown RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 SPIRE2Q8WWL2 714 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 PPP1R14BQ96C90 147 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 HAUS1Q96CS2 278 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 TIPINQ9BVW5 301 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 INO80BQ9C086 356 aaPredicted RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 MUC3BQ9H195 1237 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 CAPN11Q9UMQ6 739 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 DAAM1Q9Y4D1 1078 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 USP15Q9Y4E8 981 aaPredicted RBP8.59□□□□□ -1.03
VPS11-209ENST00000622309 NFS1Q9Y697 457 aa8.59□□□□□ -1.03
VPS11-209ENST00000622309 DISP2A7MBM2 1401 aa8.59□□□□□ -1.04
VPS11-209ENST00000622309 E7EWF7 191 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 SHBGP04278 402 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 MLH1P40692 756 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TRADDQ15628 312 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 PROSER3Q2NL68 480 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TCP11X2Q5H9J9 407 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 ZNF554Q86TJ5 538 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 KLHL7Q8IXQ5 586 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 SLC43A3Q8NBI5 491 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 MAP3K14Q99558 947 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TCHPQ9BT92 498 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 MRGBPQ9NV56 204 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 FBXL5Q9UKA1 691 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 COMMD3-BMI1R4GMX3 469 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 HGSO14964 777 aaPredicted RBP8.58□□□□□ -1.04
VPS11-209ENST00000622309 ATP9AO75110 1047 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 IFNAR2P48551 515 aa8.58□□□□□ -1.04
VPS11-209ENST00000622309 CWF19L2Q2TBE0 894 aaKnown RBP8.58□□□□□ -1.04
VPS11-209ENST00000622309 OLFML2BQ68BL8 750 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms