RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 UGCGQ16739 394 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 FAM47CQ5HY64 1035 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 SWSAP1Q6NVH7 229 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 MIS18BP1Q6P0N0 1132 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 BRAPQ7Z569 592 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 SLFN12Q8IYM2 578 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 GLG1Q92896 1179 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-217ENST00000621474 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 TBX21Q9UL17 535 aa16.15■□□□□ 0.18
CBWD3-217ENST00000621474 ZNF215Q9UL58 517 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-217ENST00000621474 NOL7Q9UMY1 257 aaKnown RBP16.15■□□□□ 0.18
CBWD3-217ENST00000621474 MAFBQ9Y5Q3 323 aaPredicted RBP16.15■□□□□ 0.18
CBWD3-217ENST00000621474 ZNF862O60290 1169 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 CLTBP09497 229 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 SYN1P17600 705 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 ADAM17P78536 824 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-217ENST00000621474 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
CBWD3-217ENST00000621474 ZNF302Q9NR11 478 aa16.14■□□□□ 0.17
CBWD3-217ENST00000621474 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 PSAPP07602 524 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 SFNP31947 248 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 TXKP42681 527 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 JAK3P52333 1124 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 PTGDRQ13258 359 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 MIER3Q7Z3K6 550 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 C7orf31Q8N865 590 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 RDM1Q8NG50 284 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 AZI2Q9H6S1 392 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 SAMM50Q9Y512 469 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 TANC1Q9C0D5 1861 aa16.13■□□□□ 0.17
CBWD3-217ENST00000621474 EVPLQ92817 2033 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 POTEMA6NI47 508 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 BACH1O14867 736 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 MARCH8Q5T0T0 291 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 WNT8BQ93098 351 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 WRAP73Q9P2S5 460 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 ZBTB42B2RXF5 422 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 H0YGN5 161 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 KIAA0355O15063 1070 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 STBD1O95210 358 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 CYP2C9P11712 490 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 SLC26A2P50443 739 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 IL17AQ16552 155 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 PTGISQ16647 500 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 PDXDC2PQ6P474 469 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 DHX38Q92620 1227 aaKnown RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
CBWD3-217ENST00000621474 TCEAL9Q9UHQ7 104 aa16.12■□□□□ 0.17
CBWD3-217ENST00000621474 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 UMODL1Q5DID0 1318 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 SIP14410 1827 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 ARID2Q68CP9 1835 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 RBAK-RBAKDNI3L0D1 243 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 TREHO43280 583 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 BECN1Q14457 450 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 ZBTB10Q96DT7 871 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 TMEM39AQ9NV64 488 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
CBWD3-217ENST00000621474 LAMA2P24043 3122 aaKnown RBP16.11■□□□□ 0.17
CBWD3-217ENST00000621474 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 POTEB3A0JP26 581 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 TLR3O15455 904 aaKnown RBP16.1■□□□□ 0.17
CBWD3-217ENST00000621474 MARCH6O60337 910 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 INSRRP14616 1297 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 TECP42680 631 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 NCAPH2Q6IBW4 605 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 POTEBQ6S5H4 581 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 TRAPPC12Q8WVT3 735 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 HSD17B14Q9BPX1 270 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 NOC4LQ9BVI4 516 aaKnown RBP16.1■□□□□ 0.17
CBWD3-217ENST00000621474 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
CBWD3-217ENST00000621474 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
CBWD3-217ENST00000621474 MBLAC1A4D2B0 266 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 LAD1O00515 517 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 ZSCAN22P10073 491 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 DDIT3P35638 169 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 PRKCEQ02156 737 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 EPHA7Q15375 998 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms