RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CHRNA1P02708 482 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 VCANP13611 3396 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 ACTR2P61160 394 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 ERVK-21P61565 698 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 AKAP17AQ02040 695 aaKnown RBP27.37■■□□□ 1.97
ATXN3-253ENST00000621269 JAKMIP3Q5VZ66 844 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 FBXL16Q8N461 479 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 C6orf50Q9HD87 102 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 TRPC6Q9Y210 931 aa27.37■■□□□ 1.97
ATXN3-253ENST00000621269 MBLAC1A4D2B0 266 aaPredicted RBP27.36■■□□□ 1.97
ATXN3-253ENST00000621269 PRPF3O43395 683 aaKnown RBP27.36■■□□□ 1.97
ATXN3-253ENST00000621269 INSRRP14616 1297 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 MCTP2Q6DN12 878 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 NIPA1Q7RTP0 329 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 TOP1MTQ969P6 601 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 PCYT2Q99447 389 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 TRANK1O15050 2925 aa27.36■■□□□ 1.97
ATXN3-253ENST00000621269 LPXNO60711 386 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 UPP2O95045 317 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 RPLP2P05387 115 aaKnown RBP27.35■■□□□ 1.97
ATXN3-253ENST00000621269 STAT5BP51692 787 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 HTRA4P83105 476 aaPredicted RBP27.35■■□□□ 1.97
ATXN3-253ENST00000621269 ITGB3BPQ13352 177 aaPredicted RBP27.35■■□□□ 1.97
ATXN3-253ENST00000621269 AAK1Q2M2I8 961 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 MARCH8Q5T0T0 291 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 PLPPR4Q7Z2D5 763 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 GDPD5Q8WTR4 605 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 DNAJB3Q8WWF6 145 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 LMCD1Q9NZU5 365 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 CUL9Q8IWT3 2517 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 NID2Q14112 1375 aa27.35■■□□□ 1.97
ATXN3-253ENST00000621269 ESYT2A0FGR8 921 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 GHRP10912 638 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 YME1L1Q96TA2 773 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 AGXT2Q9BYV1 514 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 ZMYND12Q9H0C1 365 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 SUGCTQ9HAC7 445 aa27.34■■□□□ 1.97
ATXN3-253ENST00000621269 MYO9BQ13459 2157 aa27.33■■□□□ 1.97
ATXN3-253ENST00000621269 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.33■■□□□ 1.97
ATXN3-253ENST00000621269 GNA11P29992 359 aa27.33■■□□□ 1.97
ATXN3-253ENST00000621269 PLA2G4DQ86XP0 818 aa27.33■■□□□ 1.97
ATXN3-253ENST00000621269 REXO1Q8N1G1 1221 aaKnown RBP27.33■■□□□ 1.97
ATXN3-253ENST00000621269 PHKBQ93100 1093 aa27.33■■□□□ 1.97
ATXN3-253ENST00000621269 DDX39AO00148 427 aaKnown RBP27.32■■□□□ 1.96
ATXN3-253ENST00000621269 NEFLP07196 543 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 CYP3A4P08684 503 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 MGAT3Q09327 533 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 PLCB4Q15147 1175 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 PKN1Q16512 942 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 SP7Q8TDD2 431 aaPredicted RBP27.32■■□□□ 1.96
ATXN3-253ENST00000621269 ADAMTS19Q8TE59 1207 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 FAM49AQ9H0Q0 323 aaPredicted RBP27.32■■□□□ 1.96
ATXN3-253ENST00000621269 COG5Q9UP83 839 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 CDY2AQ9Y6F7 541 aa27.32■■□□□ 1.96
ATXN3-253ENST00000621269 POTEB3A0JP26 581 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 FAM86B1E9PN63 330 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 TNFRSF10AO00220 468 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 EPB41L2O43491 1005 aaKnown RBP27.31■■□□□ 1.96
ATXN3-253ENST00000621269 ATG7O95352 703 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 FAM86B2P0C5J1 330 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 SLC26A2P50443 739 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 MRPS6P82932 125 aaKnown RBP27.31■■□□□ 1.96
ATXN3-253ENST00000621269 TFF2Q03403 129 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 LPIN1Q14693 890 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 IER5Q5VY09 327 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 POTEBQ6S5H4 581 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 FBXO22Q8NEZ5 403 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 BICD2Q8TD16 824 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 C17orf80Q9BSJ5 609 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 SLC26A6Q9BXS9 759 aa27.31■■□□□ 1.96
ATXN3-253ENST00000621269 MICAL3Q7RTP6 2002 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 M0QZ92 97 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 BACH1O14867 736 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 FAM160B1Q5W0V3 765 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 RUFY3Q7L099 469 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 ZBTB10Q96DT7 871 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 SAMD11Q96NU1 681 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 RNF26Q9BY78 433 aaPredicted RBP27.3■■□□□ 1.96
ATXN3-253ENST00000621269 PCDHA2Q9Y5H9 948 aa27.3■■□□□ 1.96
ATXN3-253ENST00000621269 SPTBN5Q9NRC6 3674 aaKnown RBP27.3■■□□□ 1.96
ATXN3-253ENST00000621269 COL4A4P53420 1690 aaPredicted RBP27.3■■□□□ 1.96
ATXN3-253ENST00000621269 REV3LO60673 3130 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 IPO5O00410 1097 aaKnown RBP27.29■■□□□ 1.96
ATXN3-253ENST00000621269 PPFIA3O75145 1194 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 CCNE2O96020 404 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 PDIA3P30101 505 aaKnown RBP27.29■■□□□ 1.96
ATXN3-253ENST00000621269 CCT2P78371 535 aaKnown RBP27.29■■□□□ 1.96
ATXN3-253ENST00000621269 NTRK3Q16288 839 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 FBXO47Q5MNV8 452 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 TSHZ1Q6ZSZ6 1077 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 CCDC148Q8NFR7 591 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 TRAPPC12Q8WVT3 735 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 CRYGNQ8WXF5 182 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 HLA-CQ95604 372 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 ZNF577Q9BSK1 485 aa27.29■■□□□ 1.96
ATXN3-253ENST00000621269 KAT6AQ92794 2004 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 IGLV3-22A0A075B6J6 115 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 IGKV6D-21A0A0A0MT36 114 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 IFNAR1P17181 557 aa27.28■■□□□ 1.96
ATXN3-253ENST00000621269 EVCP57679 992 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms