RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 SH3GLB2Q9NR46 395 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 ZNF18P17022 549 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 SHMT1P34896 483 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 FKBP3Q00688 224 aaKnown RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 MAN2A1Q16706 1144 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 VWA3BQ502W6 1294 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 CDAN1Q8IWY9 1227 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 THAP9Q9H5L6 903 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 MORC2Q9Y6X9 1032 aaPredicted RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 PHRF1Q9P1Y6 1649 aaKnown RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 ATP1A2P50993 1020 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 PPFIA1Q13136 1202 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 PDXDC2PQ6P474 469 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 LDHDQ86WU2 507 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 VTI1AQ96AJ9 217 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 RMDN3Q96TC7 470 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 SPZ1Q9BXG8 430 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 STRCP1A6NGW2 1772 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 PALM3A6NDB9 673 aaPredicted RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 RPL13P26373 211 aaKnown RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 KCNJ6P48051 423 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 VSNL1P62760 191 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 CRY2Q49AN0 593 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 NFRKBQ6P4R8 1299 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 TRIM65Q6PJ69 517 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 CCDC25Q86WR0 208 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
GGA3-222ENST00000621217 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 MED4Q9NPJ6 270 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 FRMD4BQ9Y2L6 1034 aa9.92□□□□□ -0.82
GGA3-222ENST00000621217 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 LOC102724159A0A0B4J2E5 919 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 ESYT3A0FGR9 886 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 MARK3P27448 753 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SARSP49591 514 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 APBA1Q02410 837 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 PWP2Q15269 919 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 NBPF12Q5TAG4 269 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 C6orf163Q5TEZ5 329 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SNRNP48Q6IEG0 339 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 SPATA24Q86W54 205 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SLFN12Q8IYM2 578 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 METTL13Q8N6R0 699 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 CABS1Q96KC9 395 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 ZDHHC15Q96MV8 337 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 TSGA10Q9BZW7 698 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 AS3MTQ9HBK9 375 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 IVNS1ABPQ9Y6Y0 642 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SLIT2O94813 1529 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 GOLGA6BA6NDN3 693 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 K7ENM7 598 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 RNF225M0QZC1 329 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 FOSP01100 380 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 PCK1P35558 622 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 COASYQ13057 564 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 CYP2W1Q8TAV3 490 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 FAM71BQ8TC56 605 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 NAP1L4Q99733 375 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 TEKT3Q9BXF9 490 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 PCDHA13Q9Y5I0 950 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 ALS2Q96Q42 1657 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 KIF1CO43896 1103 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 PEX19P40855 299 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 PPP1R2P41236 205 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SFR1Q86XK3 245 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 BCAS4Q8TDM0 211 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 UBLCP1Q8WVY7 318 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 GLIS2Q9BZE0 524 aaPredicted RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 HSD3B7Q9H2F3 369 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 GOLPH3Q9H4A6 298 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 LIMA1Q9UHB6 759 aaKnown RBP9.91□□□□□ -0.82
GGA3-222ENST00000621217 HACL1Q9UJ83 578 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
GGA3-222ENST00000621217 SPDYE2BA6NHP3 402 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
GGA3-222ENST00000621217 SPDYE6P0CI01 402 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 GUCY2DQ02846 1103 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 CASP8Q14790 479 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 UNC13DQ70J99 1090 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 KSR1Q8IVT5 923 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 RAD54LQ92698 747 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 MMS19Q96T76 1030 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 KRT12Q99456 494 aa9.9□□□□□ -0.82
GGA3-222ENST00000621217 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
GGA3-222ENST00000621217 DDNO94850 711 aaPredicted RBP9.9□□□□□ -0.82
GGA3-222ENST00000621217 SLC8A1P32418 973 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms