RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 PPME1Q9Y570 386 aa12.35□□□□□ -0.43
SNORD3D-201ENST00000619178 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
SNORD3D-201ENST00000619178 TRIP12Q14669 1992 aaPredicted RBP12.35□□□□□ -0.43
SNORD3D-201ENST00000619178 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 ZNF202O95125 648 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 INHAP05111 366 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 SMPD1P17405 629 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 LBX1P52954 281 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 SP2Q02086 613 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 SP4Q02446 784 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 ARHGAP1Q07960 439 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 TPH2Q8IWU9 490 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 CKAP2LQ8IYA6 745 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 ELOA2Q8IYF1 753 aaPredicted RBP12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 GLG1Q92896 1179 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 LXNQ9BS40 222 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 KCND2Q9NZV8 630 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 HPSEQ9Y251 543 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
SNORD3D-201ENST00000619178 DYNC1LI2O43237 492 aaPredicted RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GADD45BO75293 160 aaPredicted RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 LYPLA2O95372 231 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 ARIH2O95376 493 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 STAT5BP51692 787 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 NDUFA8P51970 172 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GRIN1Q05586 938 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 SPECC1Q5M775 1068 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 SV2BQ7L1I2 683 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 RNF180Q86T96 592 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 CATSPER3Q86XQ3 398 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 FMR1NBQ8N0W7 255 aaPredicted RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 PDILTQ8N807 584 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 ARRDC4Q8NCT1 418 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 LARP4BQ92615 738 aaKnown RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GJA10Q969M2 543 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 DHX58Q96C10 678 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 UIMC1Q96RL1 719 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GPR20Q99678 358 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 TNMDQ9H2S6 317 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
SNORD3D-201ENST00000619178 A6NJR5 290 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 EML1O00423 815 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 TRAK2O60296 914 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 SLITRK3O94933 977 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 CCNE2O96020 404 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 MMP3P08254 477 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 PLCG1P19174 1290 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 GJA9P57773 515 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 CYP4A11Q02928 519 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 SWSAP1Q6NVH7 229 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 KRBA2Q6ZNG9 492 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 JPH2Q9BR39 696 aaPredicted RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 TIPINQ9BVW5 301 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 DACT1Q9NYF0 836 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 MAFBQ9Y5Q3 323 aaPredicted RBP12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 IGSF9BQ9UPX0 1349 aa12.32□□□□□ -0.44
SNORD3D-201ENST00000619178 COL1A2P08123 1366 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 MED24O75448 989 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 LGR5O75473 907 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 CABYRO75952 493 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 SMC2O95347 1197 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms