RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	PYGB	P11216	843 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	CHN1	P15882	459 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRAPPC10	P48553	1259 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	ADAM9	Q13443	819 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PARP6	Q2NL67	630 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	FAM133B	Q5BKY9	247 aa	Known RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	MIIP	Q5JXC2	388 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	TBC1D9B	Q66K14	1250 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	TYW1B	Q6NUM6	668 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	DPY19L2	Q6NUT2	758 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	SPICE1	Q8N0Z3	855 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	UBAC1	Q9BSL1	405 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	FAM167B	Q9BTA0	163 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	ISCA1	Q9BUE6	129 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	RNF26	Q9BY78	433 aa	Predicted RBP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	TXLNGY	Q9BZA5	131 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	SLITRK6	Q9H5Y7	841 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	PCDHGA4	Q9Y5G9	962 aa		11.7	□□□□□ -0.54
CPEB1-215	ENST00000617958	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	BACH1	O14867	736 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	KIF4A	O95239	1232 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	KRT16	P08779	473 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	KRT2	P35908	639 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	GNAQ	P50148	359 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	PLS1	Q14651	629 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	NAB2	Q15742	525 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	COBLL1	Q53SF7	1204 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	C1QTNF12	Q5T7M4	302 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	IRGC	Q6NXR0	463 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCDC84	Q86UT8	332 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	C2CD5	Q86YS7	1000 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	LRRC34	Q8IZ02	419 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	STAG2	Q8N3U4	1231 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	ENDOV	Q8N8Q3	282 aa	Known RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	FAM192A	Q9GZU8	254 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	PUS7L	Q9H0K6	701 aa	Known RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CNNM2	Q9H8M5	875 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	RNPEPL1	Q9HAU8	725 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	FAM114A2	Q9NRY5	505 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	ABCF3	Q9NUQ8	709 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRMT112	Q9UI30	125 aa	Known RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	USP15	Q9Y4E8	981 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRIM49B	A6NDI0	452 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	WTIP	A6NIX2	430 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CREB3	O43889	395 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	PLEK	P08567	350 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CALB2	P22676	271 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	SH3BGR	P55822	239 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	TIMM10	P62072	90 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	FOXO4	P98177	505 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCDC15	Q0P6D6	951 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCDC152	Q4G0S7	254 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	TMTC2	Q8N394	836 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	OXER1	Q8TDS5	423 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	TBC1D5	Q92609	795 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	SYN2	Q92777	582 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	KIFAP3	Q92845	792 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	DUSP9	Q99956	384 aa	Known RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	3e-7	■■■■■ 42.3
CPEB1-215	ENST00000617958	ZWILCH	Q9H900	591 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	ANAPC4	Q9UJX5	808 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	FBXO3	Q9UK99	471 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	SIK3	Q9Y2K2	1263 aa		11.69	□□□□□ -0.54
CPEB1-215	ENST00000617958	DCDC2C	A8MYV0	355 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958		B4E1Z4	1266 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	UBE2Q2L	H0YL09	131 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	EYA2	O00167	538 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	PRPF3	O43395	683 aa	Known RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	SUN1	O94901	812 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	GJB6	O95452	261 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	SP100	P23497	879 aa	Predicted RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCNE1	P24864	410 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	RANBP1	P43487	201 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	PMS1	P54277	932 aa	Known RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	DIXDC1	Q155Q3	683 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRADD	Q15628	312 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	TSNAXIP1	Q2TAA8	658 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	PHF20	Q9BVI0	1012 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	TRIM7	Q9C029	511 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	STMN4	Q9H169	189 aa	Predicted RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	ADAM7	Q9H2U9	754 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	RXFP1	Q9HBX9	757 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	PHF24	Q9UPV7	400 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	SPDYE5	A6NIY4	337 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	CCDC169	A6NNP5	214 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	AGT	P01019	485 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	FAM163B	P0C2L3	166 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	LONP1	P36776	959 aa	Known RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	SFSWAP	Q12872	951 aa	Known RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	LRRC24	Q50LG9	513 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	COL23A1	Q86Y22	540 aa	Predicted RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	CSGALNACT2	Q8N6G5	542 aa		11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.68	□□□□□ -0.54
CPEB1-215	ENST00000617958	PRCC	Q92733	491 aa	Predicted RBP	11.68	□□□□□ -0.54

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