RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ELP1O95163 1332 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SASH1O94885 1247 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PRKAA1Q13131 559 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SKA2Q8WVK7 121 aaPredicted RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 PBXIP1Q96AQ6 731 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MMRN2Q9H8L6 949 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 KIAA1671Q9BY89 1806 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PYGLP06737 847 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 AP2B1P63010 937 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SLC39A6Q13433 755 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PSMD6Q15008 389 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 XKR9Q5GH70 373 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 TTC41PQ6P2S7 1318 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DLEC1Q9Y238 1755 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MGAMO43451 1857 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CASRP41180 1078 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DNAJC10Q8IXB1 793 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DCP1BQ8IZD4 617 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 CASP10Q92851 521 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CDK5RAP1Q96SZ6 601 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 YIPF2Q9BWQ6 316 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 VPS37BQ9H9H4 285 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SUSD2Q9UGT4 822 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 LIMCH1Q9UPQ0 1083 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FAM95CA0A1B0GW59 222 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 BMP3P12645 472 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SCNN1DP51172 638 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PPP4R4Q6NUP7 873 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 NEDD1Q8NHV4 660 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 WDR11Q9BZH6 1224 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CLCA2Q9UQC9 943 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PRAMEF22A3QJZ6 481 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 AVPR1AP37288 418 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 KRT85P78386 507 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 AKNAD1Q5T1N1 836 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SEPT14Q6ZU15 432 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FCHSD1Q86WN1 690 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 EDC3Q96F86 508 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 NFKBIZQ9BYH8 718 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ZDHHC4Q9NPG8 344 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ZMYM5Q9UJ78 669 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 COG5Q9UP83 839 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PLXNA1Q9UIW2 1896 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 USP42Q9H9J4 1324 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 A0A0G2JLW4 131 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ZBTB38Q8NAP3 1195 aaPredicted RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 KCNS3Q9BQ31 491 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FPGT-TNNI3KV9GXZ4 949 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SARNPP82979 210 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 TREML1Q86YW5 311 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SCYL3Q8IZE3 742 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DDX17Q92841 729 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 NUP62CLQ9H1M0 184 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 UBE4BO95155 1302 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 SLC9A3R1O14745 358 aaPredicted RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 ERVK-10P10266 1014 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 SCARF1Q14162 830 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 POSTNQ15063 836 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 NEK9Q8TD19 979 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 RASAL2Q9UJF2 1139 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 MOXD2PA6NHM9 499 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 KLRC2P26717 231 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 PDX1P52945 283 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 HDAC4P56524 1084 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 NCAPH2Q6IBW4 605 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 FAM13CQ8NE31 585 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 PPP1R14CQ8TAE6 165 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ZNF302Q9NR11 478 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 RTN1Q16799 776 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 GNASQ5JWF2 1037 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 SLC10A5Q5PT55 438 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 MIGA2Q7L4E1 593 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 PHLDB2Q86SQ0 1253 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 CENPKQ9BS16 269 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ATP8A2Q9NTI2 1148 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.65□□□□□ -1.82
LPP-220ENST00000617246 V9GY48 417 aaPredicted RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 V9GYY5 206 aaPredicted RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 ALCAMQ13740 583 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 PRAMEF18Q5VWM3 479 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 CYP4F22Q6NT55 531 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 MAPKAPK5Q8IW41 473 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 BICC1Q9H694 974 aaKnown RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 TNNI3P19429 210 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 GMPSP49915 693 aaPredicted RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 ATN1P54259 1190 aaPredicted RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 DEUP1Q05D60 604 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ZNF827Q17R98 1081 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 TAS1R3Q7RTX0 852 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ARHGAP18Q8N392 663 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 HUS1O60921 280 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ME1P48163 572 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 ZNF75DP51815 510 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 KPNA2P52292 529 aaKnown RBP3.65□□□□□ -1.82
LPP-220ENST00000617246 SLITRK1Q96PX8 696 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 C1orf112Q9NSG2 853 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 RGL1Q9NZL6 768 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 PCDHB3Q9Y5E6 796 aa3.65□□□□□ -1.82
LPP-220ENST00000617246 HSPD1P10809 573 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms