RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 EHMT1Q9H9B1 1298 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 GINM1Q9NU53 330 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 CYP39A1Q9NYL5 469 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 PITPNM2Q9BZ72 1349 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 RLFQ13129 1914 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 A0A0U1RQJ8 604 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 RGS20O76081 388 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 GSDMDP57764 484 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 EHHADHQ08426 723 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 PPP2R5CQ13362 524 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 UGCGQ16739 394 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 Q3C1V9 767 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 WDR78Q5VTH9 848 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 PCNX4Q63HM2 1172 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 E4F1Q66K89 784 aaPredicted RBP8.65□□□□□ -1.02
NEK3-207ENST00000617054 RINT1Q6NUQ1 792 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 MIER3Q7Z3K6 550 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 SCFD1Q8WVM8 642 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 ATRIPQ8WXE1 791 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 TUBGCP2Q9BSJ2 902 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 TEX13BQ9BXU2 312 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 AGO4Q9HCK5 861 aaKnown RBP8.65□□□□□ -1.02
NEK3-207ENST00000617054 TXNRD2Q9NNW7 524 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 ADAMTS5Q9UNA0 930 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 PCDHA2Q9Y5H9 948 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 RPTORQ8N122 1335 aa8.65□□□□□ -1.02
NEK3-207ENST00000617054 GYPCP04921 128 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 PGK2P07205 417 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 NMT1P30419 496 aaKnown RBP8.65□□□□□ -1.03
NEK3-207ENST00000617054 MTIF2P46199 727 aaKnown RBP8.65□□□□□ -1.03
NEK3-207ENST00000617054 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.03
NEK3-207ENST00000617054 FILIP1LQ4L180 1135 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 NOL9Q5SY16 702 aaKnown RBP8.65□□□□□ -1.03
NEK3-207ENST00000617054 CENPPQ6IPU0 288 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 C12orf42Q96LP6 360 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 DESI2Q9BSY9 194 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 JADE2Q9NQC1 790 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 LIMA1Q9UHB6 759 aaKnown RBP8.65□□□□□ -1.03
NEK3-207ENST00000617054 UBIAD1Q9Y5Z9 338 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 ASTN1O14525 1302 aa8.65□□□□□ -1.03
NEK3-207ENST00000617054 GPR37O15354 613 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CCNE2O96020 404 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CYP2C8P10632 490 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 GJA5P36382 358 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SOX10P56693 466 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CT47A1Q5JQC4 288 aaPredicted RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 USP50Q70EL3 339 aaPredicted RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 CCDC65Q8IXS2 484 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 ANKRD13AQ8IZ07 590 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 MYOCDQ8IZQ8 938 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 TSC1Q92574 1164 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SPTLC3Q9NUV7 552 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 MAGEC2Q9UBF1 373 aaPredicted RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 LRRC10BA6NIK2 292 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CLIC2O15247 247 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 PBX1P40424 430 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 NPEPPSP55786 919 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SP2Q02086 613 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 APBA1Q02410 837 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SEMA3FQ13275 785 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 PLA2G4FQ68DD2 849 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 SEPT14Q6ZU15 432 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 TOGARAM2Q6ZUX3 1019 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 MYCT1Q8N699 235 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 CTAGE1Q96RT6 745 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 POLR3CQ9BUI4 534 aaPredicted RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 NOC4LQ9BVI4 516 aaKnown RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 ASCC2Q9H1I8 757 aaPredicted RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
NEK3-207ENST00000617054 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
NEK3-207ENST00000617054 DPYSL4O14531 572 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 GCNT3O95395 438 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 NF2P35240 595 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 HOXD13P35453 343 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 SETQ01105 290 aaPredicted RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 VSIG10LQ86VR7 867 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 PPFIBP1Q86W92 1011 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 TMEM139Q8IV31 216 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 GUF1Q8N442 669 aaKnown RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 CCDC150Q8NCX0 1101 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 PCMTD1Q96MG8 357 aaPredicted RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 BAG1Q99933 345 aaPredicted RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 ACAD9Q9H845 621 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 BICDL2A1A5D9 508 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 EYA4O95677 639 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 TBC1D8BQ0IIM8 1120 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 MIIPQ5JXC2 388 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 B3GNT9Q6UX72 402 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 ERO1BQ86YB8 467 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
NEK3-207ENST00000617054 THAP9Q9H5L6 903 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 GPRC5CQ9NQ84 441 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 AGPAT5Q9NUQ2 364 aa8.63□□□□□ -1.03
NEK3-207ENST00000617054 DOCK5Q9H7D0 1870 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms