RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 GREM2Q9H772 168 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 ABCF3Q9NUQ8 709 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 SLC30A1Q9Y6M5 507 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 GOLGA6L10A0A0M3HER8 536 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 PI4KAP2A4QPH2 592 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 UBE2Q2LH0YL09 131 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 ZBTB48P10074 688 aaPredicted RBP16.76■□□□□ 0.27
NOP56-220ENST00000616692 MTTPP55157 894 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
NOP56-220ENST00000616692 PI4KAP1Q8N8J0 262 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 ZNF296Q8WUU4 475 aaPredicted RBP16.76■□□□□ 0.27
NOP56-220ENST00000616692 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
NOP56-220ENST00000616692 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 ACTN4O43707 911 aaKnown RBP16.76■□□□□ 0.27
NOP56-220ENST00000616692 STAM2O75886 525 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 F13A1P00488 732 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 RHOXF2BP0C7M4 288 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 KIF11P52732 1056 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 CYP4A11Q02928 519 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 KIF5AQ12840 1032 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 PDCLQ13371 301 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 CCT7Q99832 543 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 RHOXF2Q9BQY4 288 aa16.76■□□□□ 0.27
NOP56-220ENST00000616692 LACTB2Q53H82 288 aaPredicted RBP16.75■□□□□ 0.27
NOP56-220ENST00000616692 SPRYD7Q5W111 196 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 KAZNQ674X7 775 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 PLPP6Q8IY26 295 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 COG1Q8WTW3 980 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 WDR60Q8WVS4 1066 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 CLMNQ96JQ2 1002 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 PCNTO95613 3336 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 ECM29Q5VYK3 1845 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 CCT6AP40227 531 aaKnown RBP16.75■□□□□ 0.27
NOP56-220ENST00000616692 BCL2A1Q16548 175 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 LMNTD2Q8IXW0 634 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 ESX1Q8N693 406 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
NOP56-220ENST00000616692 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
NOP56-220ENST00000616692 IKBKGQ9Y6K9 419 aa16.75■□□□□ 0.27
NOP56-220ENST00000616692 GOLGA8KD6RF30 607 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 AGPSO00116 658 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 CASP7P55210 303 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 SOX10P56693 466 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 TUBA1BP68363 451 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 ANO7Q6IWH7 933 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 NEPROQ6NW34 567 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 TUBA1AQ71U36 451 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 DAAM2Q86T65 1068 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 NAF1Q96HR8 494 aaKnown RBP16.74■□□□□ 0.27
NOP56-220ENST00000616692 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 SYT15Q9BQS2 421 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 OSBPL7Q9BZF2 842 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 ZNF304Q9HCX3 659 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
NOP56-220ENST00000616692 GEMIN4P57678 1058 aaKnown RBP16.74■□□□□ 0.27
NOP56-220ENST00000616692 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
NOP56-220ENST00000616692 TTLL12Q14166 644 aaPredicted RBP16.74■□□□□ 0.27
NOP56-220ENST00000616692 GCKRQ14397 625 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 AGAP11Q8TF27 550 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.74■□□□□ 0.27
NOP56-220ENST00000616692 RPGRIP1Q96KN7 1286 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 IRS2Q9Y4H2 1338 aa16.74■□□□□ 0.27
NOP56-220ENST00000616692 LINC00854A0A1B0GVQ3 168 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 ANKRD62A6NC57 917 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 EIF4E1BA6NMX2 242 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 HNRNPRO43390 633 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 CCNG1P51959 295 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 TAF11Q15544 211 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 ANKRD20A2Q5SQ80 823 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 ANKRD20A1Q5TYW2 823 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 GKAP1Q5VSY0 366 aaPredicted RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 ANKRD20A3Q5VUR7 823 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 IFT43Q96FT9 208 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 SMC6Q96SB8 1091 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 SP100P23497 879 aaPredicted RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 SAFBQ15424 915 aaKnown RBP eCLIP16.73■□□□□ 0.27
NOP56-220ENST00000616692 SPRED3Q2MJR0 410 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 SUPT20HL1Q3ZLR7 823 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 HIBCHQ6NVY1 386 aaPredicted RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 MAELQ96JY0 434 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 IL1R1P14778 569 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
NOP56-220ENST00000616692 ALS2CLQ60I27 953 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 P3H4Q92791 437 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 PMM1Q92871 262 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 CGREF1Q99674 301 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 DRC3Q9H069 523 aa16.73■□□□□ 0.27
NOP56-220ENST00000616692 ATAD3AQ9NVI7 634 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms