RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 NRDCO43847 1150 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 TBCAO75347 108 aaKnown RBP11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 RINT1Q6NUQ1 792 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 SFR1Q86XK3 245 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 CHST13Q8NET6 341 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 TSG101Q99816 390 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 TBC1D22BQ9NU19 505 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 SAMM50Q9Y512 469 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 ITIH6Q6UXX5 1313 aa11.11□□□□□ -0.63
AL353770.3-201ENST00000616253 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ATP9AO75110 1047 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 P4HBP07237 508 aaKnown RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 UBXN1Q04323 297 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 TC2NQ8N9U0 490 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 PAGR1Q9BTK6 254 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 MAF1Q9H063 256 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 PES1O00541 588 aaKnown RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 MTIF2P46199 727 aaKnown RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 CASP5P51878 434 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 HERVK_113P62684 666 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 MOGSQ13724 837 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 MAP1SQ66K74 1059 aaPredicted RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 LRRC55Q6ZSA7 311 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 C1orf186Q6ZWK4 172 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 INPP4AQ96PE3 977 aaPredicted RBP11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 TUBGCP2Q9BSJ2 902 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 SPATC1LQ9H0A9 340 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 TMX1Q9H3N1 280 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 ZNF408Q9H9D4 720 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 FBXO40Q9UH90 709 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 TCEAL9Q9UHQ7 104 aa11.1□□□□□ -0.63
AL353770.3-201ENST00000616253 PFASO15067 1338 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 B4DLN1 442 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 TRAF5O00463 557 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 CNMDO75829 334 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 RGS20O76081 388 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 KIF20AO95235 890 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 CCNE2O96020 404 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 TPM2P07951 284 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 GAP43P17677 238 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 GJA5P36382 358 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 KRT76Q01546 638 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 RBL2Q08999 1139 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 DNTTIP2Q5QJE6 756 aaKnown RBP11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 NCAPG2Q86XI2 1143 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 ZSWIM4Q9H7M6 989 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 COL4A3BPQ9Y5P4 624 aa11.09□□□□□ -0.63
AL353770.3-201ENST00000616253 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 WDR64B1ANS9 1081 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 FAM13AO94988 1023 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 GYPCP04921 128 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 MYBP10242 640 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 JAK3P52333 1124 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 CNTN2Q02246 1040 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 EPM2AIP1Q7L775 607 aaPredicted RBP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 FASTKD5Q7L8L6 764 aaKnown RBP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 ZNF507Q8TCN5 953 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 NOC4LQ9BVI4 516 aaKnown RBP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 KCTD10Q9H3F6 313 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 MRPL44Q9H9J2 332 aaKnown RBP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 KCND2Q9NZV8 630 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 LRRC37A2A6NM11 1700 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 SFI1A8K8P3 1242 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 NKRFO15226 690 aaKnown RBP eCLIP11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 MAFGO15525 162 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 MFAP3LO75121 409 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 STAM2O75886 525 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 KCNA2P16389 499 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 CASP14P31944 242 aa11.08□□□□□ -0.64
AL353770.3-201ENST00000616253 SFNP31947 248 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms