RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
MSH6-214ENST00000616033 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 GNPTABQ3T906 1256 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 C6orf89Q6UWU4 347 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 DZIP1Q86YF9 867 aaKnown RBP14.36□□□□□ -0.11
MSH6-214ENST00000616033 ZSCAN29Q8IWY8 852 aaPredicted RBP14.36□□□□□ -0.11
MSH6-214ENST00000616033 MYOCDQ8IZQ8 938 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 ANKS4BQ8N8V4 417 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 ISCUQ9H1K1 167 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 TSKSQ9UJT2 592 aa14.36□□□□□ -0.11
MSH6-214ENST00000616033 DBR1Q9UK59 544 aaKnown RBP14.36□□□□□ -0.11
MSH6-214ENST00000616033 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 ELF3P78545 371 aaPredicted RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 USP4Q13107 963 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 CENPPQ6IPU0 288 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 RCSD1Q6JBY9 416 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 AADACL2Q6P093 401 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 ZNF662Q6ZS27 426 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 ZNF384Q8TF68 577 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 CHMP6Q96FZ7 201 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 PIGSQ96S52 555 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 PTPN22Q9Y2R2 807 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 UTP11Q9Y3A2 253 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 COL4A3BPQ9Y5P4 624 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 DCCP43146 1447 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 PGRMC1O00264 195 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 ANP32DO95626 131 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 KCNJ2P63252 427 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 DIXDC1Q155Q3 683 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 SLC18A3Q16572 532 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 SLC35G1Q2M3R5 365 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 KCNK9Q9NPC2 374 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 PLCB1Q9NQ66 1216 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 ABCF3Q9NUQ8 709 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 SLC12A6Q9UHW9 1150 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 CHD4Q14839 1912 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 E9PMD0 336 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 ITIH3Q06033 890 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 RNF10Q8N5U6 811 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 GDAP1Q8TB36 358 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 IL17RBQ9NRM6 502 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
MSH6-214ENST00000616033 PANK4Q9NVE7 773 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 TRIM33Q9UPN9 1127 aa14.35□□□□□ -0.11
MSH6-214ENST00000616033 FGFR4P22455 802 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 GRB10Q13322 594 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 ADAM9Q13443 819 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 UBE2SQ16763 222 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 SPICE1Q8N0Z3 855 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 TGFBRAP1Q8WUH2 860 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
MSH6-214ENST00000616033 OSGEPQ9NPF4 335 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 FLT1P17948 1338 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 SIPA1L3O60292 1781 aaPredicted RBP14.34□□□□□ -0.11
MSH6-214ENST00000616033 SLC37A4O43826 429 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 CDK17Q00537 523 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
MSH6-214ENST00000616033 YTHDF3Q7Z739 585 aaKnown RBP14.34□□□□□ -0.11
MSH6-214ENST00000616033 NGLY1Q96IV0 654 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 FMO2Q99518 471 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 C7orf25Q9BPX7 421 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 SPEF2Q9C093 1822 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 RGS16O15492 202 aaPredicted RBP14.34□□□□□ -0.11
MSH6-214ENST00000616033 NOL4O94818 638 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 SLC51AQ86UW1 340 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 SLC17A8Q8NDX2 589 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 ARMC2Q8NEN0 867 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 BLOC1S4Q9NUP1 217 aa14.34□□□□□ -0.11
MSH6-214ENST00000616033 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 F8W031 263 aaPredicted RBP14.33□□□□□ -0.12
MSH6-214ENST00000616033 STXBP3O00186 592 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 GFPT2O94808 682 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 SLC8A1P32418 973 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 RANBP1P43487 201 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 RCAN1P53805 252 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 FIGNQ5HY92 759 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 TRMT1LQ7Z2T5 733 aaKnown RBP14.33□□□□□ -0.12
MSH6-214ENST00000616033 ZNF571Q7Z3V5 609 aaPredicted RBP14.33□□□□□ -0.12
MSH6-214ENST00000616033 CUL5Q93034 780 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 TATDN2Q93075 761 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 MEIS1O00470 390 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 CLIC2O15247 247 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
MSH6-214ENST00000616033 KCNH2Q12809 1159 aa14.33□□□□□ -0.12
MSH6-214ENST00000616033 TMEM266Q2M3C6 531 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms